RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 PPARAQ07869 468 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 SNX1Q13596 522 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM8A1Q9UBU6 413 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 AFF2P51816 1311 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 CARD6Q9BX69 1037 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF202O95125 648 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 TEKT3Q9BXF9 490 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 GREM2Q9H772 168 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM178BQ8IXR5 827 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 SLC39A2Q9NP94 309 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 MRPL11Q9Y3B7 192 aaKnown RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 XRCC5P13010 732 aaKnown RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 SOX5P35711 763 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 FANCCQ00597 558 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 PDCD6IPQ8WUM4 868 aaKnown RBP13.37□□□□□ -0.27
TRIOBP-202ENST00000344404 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 STX2P32856 288 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 EPHB1P54762 984 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 POC1B-GALNT4F8VUJ3 575 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 HS1BP3Q53T59 392 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 TTC19Q6DKK2 380 aaPredicted RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 PIM2Q9P1W9 311 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 GOLGA8SH3BPF8 625 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 YIPF2Q9BWQ6 316 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 AMFRQ9UKV5 643 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 NSD2O96028 1365 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 LMNB1P20700 586 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 DYNLL1P63167 89 aaKnown RBP13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 TMCO5AQ8N6Q1 288 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF341Q9BYN7 854 aa13.36□□□□□ -0.27
TRIOBP-202ENST00000344404 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 GJA10Q969M2 543 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 USP19O94966 1318 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 MTERF2Q49AM1 385 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 TPX2Q9ULW0 747 aaKnown RBP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 MEIS1O00470 390 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 PTPREP23469 700 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 TFAMQ00059 246 aaKnown RBP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 RAB44Q7Z6P3 723 aaPredicted RBP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 F5H423 210 aaPredicted RBP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 TROVE2P10155 538 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 ACTN1P12814 892 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 PHBP35232 272 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 RCN2Q14257 317 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 TTLL6Q8N841 843 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 SERTAD1Q9UHV2 236 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 ESRRBO95718 433 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 STAT1P42224 750 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 PLEKHM2Q8IWE5 1019 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
TRIOBP-202ENST00000344404 GOLGA8FQ08AF8 430 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 GOLGA8DPQ0D2H9 430 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 RWDD4Q6NW29 188 aaKnown RBP13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 B4GALNT4Q76KP1 1039 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 DNAAF3Q8N9W5 541 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 GBP5Q96PP8 586 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 BAIAP2L1Q9UHR4 511 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 CD58P19256 250 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 NSUN2Q08J23 767 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 TTC4O95801 387 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF148Q9UQR1 794 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 ANXA13P27216 316 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 PPP2R5EQ16537 467 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 PTPN21Q16825 1174 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 ZNF577Q9BSK1 485 aa13.34□□□□□ -0.27
TRIOBP-202ENST00000344404 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms