RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
SYNE2-201ENST00000341472 TAF6LQ9Y6J9 622 aa23.51■■□□□ 1.35
SYNE2-201ENST00000341472 ABCB11O95342 1321 aa23.51■■□□□ 1.35
SYNE2-201ENST00000341472 ALPK3Q96L96 1907 aa23.51■■□□□ 1.35
SYNE2-201ENST00000341472 B4DLN1 442 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 KLRF2D3W0D1 207 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 CTAGE5O15320 804 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 CLTBP09497 229 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 MRPL12P52815 198 aaKnown RBP23.5■■□□□ 1.35
SYNE2-201ENST00000341472 BEX3Q00994 111 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 QRICH1Q2TAL8 776 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 TLK2Q86UE8 772 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 FBXO11Q86XK2 927 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 MCF2L2Q86YR7 1114 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 STAG2Q8N3U4 1231 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 DNERQ8NFT8 737 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 BADQ92934 168 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 LRCH3Q96II8 777 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 TMEM39AQ9NV64 488 aa23.5■■□□□ 1.35
SYNE2-201ENST00000341472 MRPL11Q9Y3B7 192 aaKnown RBP23.5■■□□□ 1.35
SYNE2-201ENST00000341472 ZEB2O60315 1214 aa23.49■■□□□ 1.35
SYNE2-201ENST00000341472 PDE4DQ08499 809 aa23.49■■□□□ 1.35
SYNE2-201ENST00000341472 FSCN1Q16658 493 aaKnown RBP23.49■■□□□ 1.35
SYNE2-201ENST00000341472 TBC1D5Q92609 795 aa23.49■■□□□ 1.35
SYNE2-201ENST00000341472 PALM3A6NDB9 673 aaPredicted RBP23.48■■□□□ 1.35
SYNE2-201ENST00000341472 KIAA0355O15063 1070 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 CDK7P50613 346 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 WTAPQ15007 396 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 DUSP28Q4G0W2 176 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 TMEM63BQ5T3F8 832 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 STOX1Q6ZVD7 989 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 CHST3Q7LGC8 479 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 ESYT1Q9BSJ8 1104 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 WDR11Q9BZH6 1224 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 MAD2L2Q9UI95 211 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 DNAH12Q6ZR08 3092 aa23.48■■□□□ 1.35
SYNE2-201ENST00000341472 RBM47A0AV96 593 aaKnown RBP23.47■■□□□ 1.35
SYNE2-201ENST00000341472 ARVCFO00192 962 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 CABYRO75952 493 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 RAG1P15918 1043 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 FAAP100Q0VG06 881 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 TMEM67Q5HYA8 995 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 CXCL17Q6UXB2 119 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 AMNQ9BXJ7 453 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 LSG1Q9H089 658 aaKnown RBP23.47■■□□□ 1.35
SYNE2-201ENST00000341472 PLXNA1Q9UIW2 1896 aa23.47■■□□□ 1.35
SYNE2-201ENST00000341472 A0A0U1RQG5 324 aaPredicted RBP23.46■■□□□ 1.35
SYNE2-201ENST00000341472 PTGS1P23219 599 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 EDNRBP24530 442 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 GRM4Q14833 912 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 BMP2KLQ5H9B9 411 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 SYTL5Q8TDW5 730 aaPredicted RBP23.46■■□□□ 1.35
SYNE2-201ENST00000341472 IGDCC4Q8TDY8 1250 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 SENP2Q9HC62 589 aa23.46■■□□□ 1.35
SYNE2-201ENST00000341472 MROH7Q68CQ1 1323 aa23.45■■□□□ 1.34
SYNE2-201ENST00000341472 CATIPQ7Z7H3 387 aa23.45■■□□□ 1.34
SYNE2-201ENST00000341472 SKAP1Q86WV1 359 aa23.45■■□□□ 1.34
SYNE2-201ENST00000341472 MB21D2Q8IYB1 491 aaPredicted RBP23.45■■□□□ 1.34
SYNE2-201ENST00000341472 NSUN6Q8TEA1 469 aaKnown RBP23.45■■□□□ 1.34
SYNE2-201ENST00000341472 MTMR8Q96EF0 704 aa23.45■■□□□ 1.34
SYNE2-201ENST00000341472 TAAR1Q96RJ0 339 aa23.45■■□□□ 1.34
SYNE2-201ENST00000341472 ZBTB5O15062 677 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 ITGB8P26012 769 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 TROAPQ12815 778 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 GPR153Q6NV75 609 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 SCFD2Q8WU76 684 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 FRMPD3Q5JV73 1810 aa23.44■■□□□ 1.34
SYNE2-201ENST00000341472 ANTXR2P58335 489 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 TRAF1Q13077 416 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 SHHQ15465 462 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 CASC1Q6TDU7 716 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 IWS1Q96ST2 819 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 RMDN3Q96TC7 470 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 RIOX1Q9H6W3 641 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 ANO2Q9NQ90 1003 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 PCDHA1Q9Y5I3 950 aa23.43■■□□□ 1.34
SYNE2-201ENST00000341472 SLC27A2O14975 620 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 NKRFO15226 690 aaKnown RBP eCLIP23.42■■□□□ 1.34
SYNE2-201ENST00000341472 TLR3O15455 904 aaKnown RBP23.42■■□□□ 1.34
SYNE2-201ENST00000341472 MCM5P33992 734 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 ITGA7Q13683 1181 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 MTA3Q9BTC8 594 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 SEZ6LQ9BYH1 1024 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 COL20A1Q9P218 1284 aa23.42■■□□□ 1.34
SYNE2-201ENST00000341472 PRC1O43663 620 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 CFBP00751 764 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 TIMP1P01033 207 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 TXNP10599 105 aaKnown RBP23.41■■□□□ 1.34
SYNE2-201ENST00000341472 PPP2R5BQ15173 497 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 NECTIN1Q15223 517 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 BRDTQ58F21 947 aaPredicted RBP23.41■■□□□ 1.34
SYNE2-201ENST00000341472 ARHGEF16Q5VV41 709 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 CREB3L3Q68CJ9 461 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 HOMER1Q86YM7 354 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 TMTC2Q8N394 836 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 SLC43A3Q8NBI5 491 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 OR6J1Q8NGC5 347 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 PIGSQ96S52 555 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
SYNE2-201ENST00000341472 TBX21Q9UL17 535 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms