RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 ZNF213O14771 459 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 FGBP02675 491 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 PDHBP11177 359 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 CPT1AP50416 773 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 ALDH5A1P51649 535 aaPredicted RBP15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 HAND2P61296 217 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 DUSP28Q4G0W2 176 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 RNF207Q6ZRF8 634 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 ZNF365Q70YC5 407 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 RPUSD2Q8IZ73 545 aaKnown RBP15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 WDR11Q9BZH6 1224 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 MSRAQ9UJ68 235 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 EYSQ5T1H1 3165 aa15.33■□□□□ 0.05
NECTIN1-203ENST00000341398 RAD50Q92878 1312 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 HIP1O00291 1037 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 SUPT20HL2P0C7V6 817 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 ACRP10323 421 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 CALML3P27482 149 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 CYP2C18P33260 490 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 PDE4DQ08499 809 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 RASGRP2Q7LDG7 609 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 DNERQ8NFT8 737 aa15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 GAS2L1Q99501 681 aaPredicted RBP15.33■□□□□ 0.04
NECTIN1-203ENST00000341398 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 NFIBO00712 420 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 NKRFO15226 690 aaKnown RBP eCLIP15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 KPNA6O60684 536 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 SDSP20132 328 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 RAB30Q15771 203 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 HERVK_113Q902F9 699 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 MAF1Q9H063 256 aa15.32■□□□□ 0.04
NECTIN1-203ENST00000341398 LRRC37A2A6NM11 1700 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 LCTP09848 1927 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 RBM47A0AV96 593 aaKnown RBP15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 GRIN2CQ14957 1233 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 RASIP1Q5U651 963 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 OR6J1Q8NGC5 347 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 MYH6P13533 1939 aa15.31■□□□□ 0.04
NECTIN1-203ENST00000341398 B4GALT4O60513 344 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 MYL3P08590 195 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 CCL23P55773 120 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 RGS22Q8NE09 1264 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 MTG1Q9BT17 334 aaPredicted RBP15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 PBX4Q9BYU1 374 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 OSBPL3Q9H4L5 887 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
NECTIN1-203ENST00000341398 GRIN2DO15399 1336 aa15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 PSMC6P62333 389 aa15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 ZKSCAN3Q9BRR0 538 aa15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 NOC4LQ9BVI4 516 aaKnown RBP15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
NECTIN1-203ENST00000341398 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 PFKMP08237 780 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 IMMTQ16891 758 aaKnown RBP15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 USH1GQ495M9 461 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 OTOP2Q7RTS6 562 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 MCF2L2Q86YR7 1114 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 TBC1D10CQ8IV04 446 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 PNMA1Q8ND90 353 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 SLC28A3Q9HAS3 691 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 TNKSO95271 1327 aa15.28■□□□□ 0.04
NECTIN1-203ENST00000341398 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 KDM4AO75164 1064 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 TXNP10599 105 aaKnown RBP15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 PTGS1P23219 599 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 PBX2P40425 430 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 NUCB1Q02818 461 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 ASPRV1Q53RT3 343 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 KRT23Q9C075 422 aa15.27■□□□□ 0.04
NECTIN1-203ENST00000341398 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms