RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RTP1P59025 263 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 RPS6P62753 249 aaKnown RBP15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 TNFAIP2Q03169 654 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 TROAPQ12815 778 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 GRM4Q14833 912 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 NECTIN1Q15223 517 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 USH1GQ495M9 461 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 FBXO11Q86XK2 927 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 TMEM87BQ96K49 555 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 AMNQ9BXJ7 453 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 PRKAG2Q9UGJ0 569 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 MAD2L2Q9UI95 211 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 Q9Y3F1 56 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.08
SIRPB3P-201ENST00000340424 LCTP09848 1927 aa15.52■□□□□ 0.07
SIRPB3P-201ENST00000340424 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ZBTB5O15062 677 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 DDAH1O94760 285 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 SLC34A2O95436 690 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 CALML3P27482 149 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ACLYP53396 1101 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ATN1P54259 1190 aaPredicted RBP15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 CREB3L3Q68CJ9 461 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 IQSEC1Q6DN90 963 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 SLC30A10Q6XR72 485 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 SAMD3Q8N6K7 520 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 IGDCC4Q8TDY8 1250 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 MTMR8Q96EF0 704 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 GDF15Q99988 308 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 CPVLQ9H3G5 476 aa15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 MAP3K20Q9NYL2 800 aaKnown RBP15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 RBM27Q9P2N5 1060 aaKnown RBP15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ZMYND8Q9ULU4 1186 aaPredicted RBP15.51■□□□□ 0.07
SIRPB3P-201ENST00000340424 ELP1O95163 1332 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 C6orf222P0C671 652 aaPredicted RBP15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 EDNRBP24530 442 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 ANTXR2P58335 489 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 CCSAPQ6IQ19 270 aaPredicted RBP15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 STAG2Q8N3U4 1231 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 LENG1Q96BZ8 264 aaPredicted RBP15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 GLT1D1Q96MS3 346 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 RIOX1Q9H6W3 641 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 STARD7Q9NQZ5 370 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 ATP11BQ9Y2G3 1177 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 MYH6P13533 1939 aa15.5■□□□□ 0.07
SIRPB3P-201ENST00000340424 MROH7Q68CQ1 1323 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 PRC1O43663 620 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 ZEB2O60315 1214 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 CALM1P0DP23 149 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 CALM2P0DP24 149 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 CALM3P0DP25 149 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 KIF5BP33176 963 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 LIFRP42702 1097 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 GHRHRQ02643 423 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 PDE4DQ08499 809 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 KCNA10Q16322 511 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 GNASQ5JWF2 1037 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 TAPT1Q6NXT6 567 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 CHST3Q7LGC8 479 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 TLK2Q86UE8 772 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 CTCFLQ8NI51 663 aaPredicted RBP15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 LZTS2Q9BRK4 669 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 SEZ6LQ9BYH1 1024 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 AP5M1Q9H0R1 490 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 LY9Q9HBG7 655 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 VAT1LQ9HCJ6 419 aa15.49■□□□□ 0.07
SIRPB3P-201ENST00000340424 RBM47A0AV96 593 aaKnown RBP15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 ADCY6O43306 1168 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 CABYRO75952 493 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 ASGR1P07306 291 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 SYN1P17600 705 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 MAGEA10P43363 369 aaPredicted RBP15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 GNAQP50148 359 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 KRT32Q14532 448 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 TRIM60Q495X7 471 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 DUSP28Q4G0W2 176 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 SKAP1Q86WV1 359 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 ZNF654Q8IZM8 581 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 TOX2Q96NM4 488 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 IWS1Q96ST2 819 aa15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 LBHD1Q9BQE6 289 aaPredicted RBP15.48■□□□□ 0.07
SIRPB3P-201ENST00000340424 LAMA3Q16787 3333 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SH2B2O14492 632 aaPredicted RBP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 SMPD1P17405 629 aa15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 FXR1P51114 621 aaKnown RBP eCLIP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 FSCN1Q16658 493 aaKnown RBP15.47■□□□□ 0.07
SIRPB3P-201ENST00000340424 NFXL1Q6ZNB6 911 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms