RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ANKRD2Q9GZV1 360 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 NAALADL2Q58DX5 795 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 C2CD5Q86YS7 1000 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 ANKRD13CQ8N6S4 541 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 MSANTD4Q8NCY6 345 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 SRCAPQ6ZRS2 3230 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 BICDL2A1A5D9 508 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 MAP2K7O14733 419 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 AMPD3Q01432 767 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 CCDC181Q5TID7 509 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 ANKRD40Q6AI12 368 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 TPTE2Q6XPS3 522 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 EHBP1Q8NDI1 1231 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 P2RX5Q93086 422 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 LACRTQ9GZZ8 138 aa18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 REXO2Q9Y3B8 237 aaKnown RBP18.38■□□□□ 0.53
CDC42EP4-201ENST00000335793 NUP98P52948 1817 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 USO1O60763 962 aaKnown RBP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 NONOQ15233 471 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 FAM114A1Q8IWE2 563 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 C6orf50Q9HD87 102 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 CAPN11Q9UMQ6 739 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 MYH3P11055 1940 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 OR52Z1P0C646 297 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 EIF6P56537 245 aaKnown RBP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 TMEM47Q9BQJ4 181 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 THAP9Q9H5L6 903 aa18.37■□□□□ 0.53
CDC42EP4-201ENST00000335793 LTBP4Q8N2S1 1624 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 TDRD12Q587J7 1177 aaKnown RBP18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 CLEC4GQ6UXB4 293 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 GIMAP7Q8NHV1 300 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 RAB21Q9UL25 225 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 MYH6P13533 1939 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 LRRIQ3A6PVS8 624 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 CKAP4Q07065 602 aaKnown RBP18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 C12orf60Q5U649 245 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 GNPATO15228 680 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 TUBBP07437 444 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 CORO7P57737 925 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 HERVK_113P62684 666 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 C4orf32Q8N8J7 132 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 RIN2Q8WYP3 895 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 ZHX3Q9H4I2 956 aa18.36■□□□□ 0.53
CDC42EP4-201ENST00000335793 MYH8P13535 1937 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 COL1A1P02452 1464 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 CCDC189A1A4V9 331 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 CCNE1P24864 410 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 CXCR5P32302 372 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 LRP6O75581 1613 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 CYTH3O43739 400 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 FGRP09769 529 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 GNA11P29992 359 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 C2orf54Q08AI8 447 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 NAIF1Q69YI7 327 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 GIMAP8Q8ND71 665 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 TBCKQ8TEA7 893 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 KAT2BQ92831 832 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 DHTKD1Q96HY7 919 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 NUP58Q9BVL2 599 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 MAD2L2Q9UI95 211 aa18.35■□□□□ 0.53
CDC42EP4-201ENST00000335793 ERLIN2O94905 339 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 SV2BQ7L1I2 683 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 TADA2BQ86TJ2 420 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 EYA3Q99504 573 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 PLEKP08567 350 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 MCM3P25205 808 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 TTI2Q6NXR4 508 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 RRAGAQ7L523 313 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 KIRREL3Q8IZU9 778 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 TRIM9Q9C026 710 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 CHD4Q14839 1912 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 A0A1W2PQC6 194 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 TACC1O75410 805 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 ZBED6P86452 979 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 NEK8Q86SG6 692 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 MED4Q9NPJ6 270 aa18.34■□□□□ 0.53
CDC42EP4-201ENST00000335793 RNF40O75150 1001 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 USP14P54578 494 aa18.33■□□□□ 0.53
CDC42EP4-201ENST00000335793 GSCP56915 257 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms