RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 COG4Q9H9E3 785 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 CCPG1Q9ULG6 757 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 FLCNQ8NFG4 579 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 PLEKHA4Q9H4M7 779 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 KIAA1468Q9P260 1216 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ZFP69BQ9UJL9 534 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 PYGMP11217 842 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ZMYND12Q9H0C1 365 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 NEUROG2Q9H2A3 272 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 CHCHD3Q9NX63 227 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 FBXO2Q9UK22 296 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 PI4KAP2A4QPH2 592 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 CHMLP26374 656 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 LRMPQ12912 555 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 MYO1EQ12965 1108 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 PI4KAP1Q8N8J0 262 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SKA2Q8WVK7 121 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 DNM3Q9UQ16 869 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ABCA10Q8WWZ4 1543 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 MAP4P27816 1152 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 LETM2Q2VYF4 491 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 KRT25Q7Z3Z0 450 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 TUBGCP3Q96CW5 907 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SLC38A10Q9HBR0 1119 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ANAPC5Q9UJX4 755 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ADGBQ8N7X0 1667 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 MAP1BP46821 2468 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 RP1L1Q8IWN7 2480 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 GRM8O00222 908 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 HEXIM1O94992 359 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 IFNA8P32881 189 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 OPTNQ96CV9 577 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SYCP2Q9BX26 1530 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ECEL1O95672 775 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ATP8B2P98198 1209 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 KRT39Q6A163 491 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 RUBCNQ92622 972 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 NAF1Q96HR8 494 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 PBKQ96KB5 322 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 HNRNPRO43390 633 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
CSMD1-201ENST00000335551 EHHADHQ08426 723 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 SPARCL1Q14515 664 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 ZBTB18Q99592 522 aa6.69□□□□□ -1.34
CSMD1-201ENST00000335551 LOC102724159A0A0B4J2E5 919 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PWP2Q15269 919 aaKnown RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CNGA3Q16281 694 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 HERC4Q5GLZ8 1057 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 MAGEB6Q8N7X4 407 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 FBXO18Q8NFZ0 1043 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 NESP48681 1621 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 H0YC42 278 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 H7C1D1 291 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 WDR47O94967 919 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 RPS6KC1Q96S38 1066 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 ATP8A1Q9Y2Q0 1164 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 IQANK1A0A1B0GTG1 560 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GOLGA8FQ08AF8 430 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GOLGA8DPQ0D2H9 430 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 HDDC2Q7Z4H3 204 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PLEKHM2Q8IWE5 1019 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 SYT2Q8N9I0 419 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GDAP1Q8TB36 358 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 SLC4A7Q9Y6M7 1214 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TEX14Q8IWB6 1497 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TOM1L1O75674 476 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CADPS2Q86UW7 1296 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 NUDCD1Q96RS6 583 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 COQ7Q99807 217 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 KLC2Q9H0B6 622 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 ARHGEF6Q15052 776 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CCDC184Q52MB2 194 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 RAPH1Q70E73 1250 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GINS4Q9BRT9 223 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 DPH5Q9H2P9 285 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 EIF3DO15371 548 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TNNC2P02585 160 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 REXO1Q8N1G1 1221 aaKnown RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 DCLK2Q8N568 766 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 OSBPL9Q96SU4 736 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 TRPV6Q9H1D0 765 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 BLOC1S6Q9UL45 172 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 MSH6P52701 1360 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 POC1B-GALNT4F8VUJ3 575 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 E2F6O75461 281 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 OATP04181 439 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CYTH2Q99418 400 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 NBNO60934 754 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CNGB3Q9NQW8 809 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 CFAP43Q8NDM7 1665 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 IQCA1LA6NCM1 817 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 ADCY3O60266 1144 aa6.68□□□□□ -1.34
CSMD1-201ENST00000335551 GCFC2P16383 781 aaKnown RBP6.68□□□□□ -1.34
CSMD1-201ENST00000335551 PDE6AP16499 860 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms