RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 WDR19Q8NEZ3 1342 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 CYP21A2P08686 494 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 SEC23AQ15436 765 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 GNASQ5JWF2 1037 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
C9orf85-201ENST00000334731 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-201ENST00000334731 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-201ENST00000334731 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 PDLIM7Q9NR12 457 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 ADD3Q9UEY8 706 aaKnown RBP13.12□□□□□ -0.31
C9orf85-201ENST00000334731 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
C9orf85-201ENST00000334731 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 ELP1O95163 1332 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
C9orf85-201ENST00000334731 SZT2Q5T011 3432 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 ASGR1P07306 291 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 SMPD1P17405 629 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 ITGB8P26012 769 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 CALML3P27482 149 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 TRDNQ13061 729 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 SLC30A10Q6XR72 485 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 ANKRD33Q7Z3H0 272 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 FBXO16Q8IX29 292 aaPredicted RBP13.11□□□□□ -0.31
C9orf85-201ENST00000334731 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 BADQ92934 168 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 TOX2Q96NM4 488 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
C9orf85-201ENST00000334731 LOC102724159A0A0B4J2E5 919 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 CLTBP09497 229 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 PTGS1P23219 599 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 CDK7P50613 346 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
C9orf85-201ENST00000334731 BEX3Q00994 111 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 PWP2Q15269 919 aaKnown RBP13.1□□□□□ -0.31
C9orf85-201ENST00000334731 USH1GQ495M9 461 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 GLT1D1Q96MS3 346 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 Q9Y3F1 56 aa13.1□□□□□ -0.31
C9orf85-201ENST00000334731 DCDC2CA8MYV0 355 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 E7EWF7 191 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
C9orf85-201ENST00000334731 PYGBP11216 843 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
C9orf85-201ENST00000334731 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 DNERQ8NFT8 737 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 MAF1Q9H063 256 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 TMEM39AQ9NV64 488 aa13.09□□□□□ -0.31
C9orf85-201ENST00000334731 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
C9orf85-201ENST00000334731 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
C9orf85-201ENST00000334731 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
C9orf85-201ENST00000334731 ARVCFO00192 962 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
C9orf85-201ENST00000334731 EDNRBP24530 442 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 CXCL17Q6UXB2 119 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 NCOA7Q8NI08 942 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 SENP2Q9HC62 589 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 MAD2L2Q9UI95 211 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
C9orf85-201ENST00000334731 ABCB11O95342 1321 aa13.08□□□□□ -0.32
C9orf85-201ENST00000334731 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
C9orf85-201ENST00000334731 KLRF2D3W0D1 207 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 DHX16O60231 1041 aaKnown RBP13.07□□□□□ -0.32
C9orf85-201ENST00000334731 RAG1P15918 1043 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 PDE4DQ08499 809 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 SHHQ15465 462 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
C9orf85-201ENST00000334731 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms