RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CDV3Q9UKY7 258 aaKnown RBP11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 BCRP11274 1271 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 PRDM4Q9UKN5 801 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 DEFA1P59665 94 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 DEFA3P59666 94 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ESR2Q92731 530 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 CNTRLQ7Z7A1 2325 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 CASP14P31944 242 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 GAS2L3Q86XJ1 694 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 UNC45AQ9H3U1 944 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ASPHQ12797 758 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 CLEC17AQ6ZS10 378 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 TRAIPQ9BWF2 469 aa11.2□□□□□ -0.62
SPTBN1-201ENST00000333896 ZC3H12BQ5HYM0 836 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 FRA10AC1Q70Z53 315 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SPATA17Q96L03 361 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 DACH2Q96NX9 599 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 TMEM51Q9NW97 253 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 MAPK8IP1Q9UQF2 711 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 HOXC8P31273 242 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ST13P50502 369 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ITKQ08881 620 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 GOLGA8FQ08AF8 430 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 GOLGA8DPQ0D2H9 430 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 MRGBPQ9NV56 204 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 TTI1O43156 1089 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 OCM2P0CE71 109 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ADCY8P40145 1251 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 GSTO1P78417 241 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SLF1Q9BQI6 1058 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SNRKQ9NRH2 765 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ZBTB10Q96DT7 871 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SYBUQ9NX95 663 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 EXOC5O00471 708 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 BACH1O14867 736 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ART3Q13508 389 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 CNGA3Q16281 694 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 NAIF1Q69YI7 327 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 UBAP1Q9NZ09 502 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 KCNA3P22001 575 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 TPP2P29144 1249 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 MAGEA1P43355 309 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 BPIFA3Q9BQP9 254 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ZNF229Q9UJW7 825 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 ITM2BQ9Y287 266 aa11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 RP1L1Q8IWN7 2480 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-201ENST00000333896 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 NR1I2O75469 434 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 VCAM1P19320 739 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 RFX1P22670 979 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GJA8P48165 433 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 ATG16L1Q676U5 607 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TRPC5Q9UL62 973 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TRAF3IP3Q9Y228 551 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 EPRSP07814 1512 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 F6X3S4 739 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GNAT2P19087 354 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 RPS6KB1P23443 525 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 MSH2P43246 934 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GRAMD1BQ3KR37 738 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 FBXL13Q8NEE6 735 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 IPO5O00410 1097 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 STAT2P52630 851 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 RAD23BP54727 409 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 KCTD17Q8N5Z5 321 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CAB39Q9Y376 341 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 POLR2DO15514 142 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TUBA3CQ13748 450 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 HIF1AQ16665 826 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms