RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 RASSF7Q02833 373 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 CFAP58Q5T655 872 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 CCDC181Q5TID7 509 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 SPDL1Q96EA4 605 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 STAMBPL1Q96FJ0 436 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 EPB41L5Q9HCM4 733 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 MYO1AQ9UBC5 1043 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 SMIM23A6NLE4 172 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 CCDC178Q5BJE1 867 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
CCDC87-201ENST00000333861 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
CCDC87-201ENST00000333861 TNKSO95271 1327 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 IFNAR1P17181 557 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 PKN1Q16512 942 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 TTC38Q5R3I4 469 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 HAUS3Q68CZ6 603 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
CCDC87-201ENST00000333861 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 TBC1D2BQ9UPU7 963 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 SLIT2O94813 1529 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 DCDC2CA8MYV0 355 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 KRT86O43790 486 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 MTIF2P46199 727 aaKnown RBP12.32□□□□□ -0.44
CCDC87-201ENST00000333861 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
CCDC87-201ENST00000333861 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
CCDC87-201ENST00000333861 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
CCDC87-201ENST00000333861 ERICH2A1L162 156 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 LRRC41Q15345 812 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 AKNAD1Q5T1N1 836 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 WLSQ5T9L3 541 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 GLIS3Q8NEA6 775 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 GJA10Q969M2 543 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 KRT12Q99456 494 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 TRIM31Q9BZY9 425 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 DISP2A7MBM2 1401 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 KCNQ2O43526 872 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 SKOR1P84550 965 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 VPS72Q15906 364 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 CCDC51Q96ER9 411 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 TACO1Q9BSH4 297 aaKnown RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 CLTAP09496 248 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 KRT2P35908 639 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 STAT6P42226 847 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 KCNB1Q14721 858 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 HIBCHQ6NVY1 386 aaPredicted RBP12.31□□□□□ -0.44
CCDC87-201ENST00000333861 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 MDM1Q8TC05 714 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 SLC39A2Q9NP94 309 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 STIM2Q9P246 746 aa12.31□□□□□ -0.44
CCDC87-201ENST00000333861 C4AP0C0L4 1744 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 C4BP0C0L5 1744 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 EP400Q96L91 3159 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 RTN2O75298 545 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 DEXIO95424 95 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
CCDC87-201ENST00000333861 MDH1P40925 334 aaKnown RBP12.3□□□□□ -0.44
CCDC87-201ENST00000333861 NLRP5P59047 1200 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC87-201ENST00000333861 ODF2Q5BJF6 829 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 TUBGCP2Q9BSJ2 902 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
CCDC87-201ENST00000333861 LLGL1Q15334 1064 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 ZNF483Q8TF39 744 aaPredicted RBP12.3□□□□□ -0.44
CCDC87-201ENST00000333861 NSMCE1Q8WV22 266 aa12.3□□□□□ -0.44
CCDC87-201ENST00000333861 CCDC42Q96M95 316 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms