RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 RCAN1P53805 252 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 ARMCX2Q7L311 632 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
LIMS1-201ENST00000332345 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 DNERQ8NFT8 737 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 FGD4Q96M96 766 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
LIMS1-201ENST00000332345 FAM184BQ9ULE4 1060 aa16.23■□□□□ 0.19
LIMS1-201ENST00000332345 MCM3APO60318 1980 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
LIMS1-201ENST00000332345 ZNF865P0CJ78 1059 aaPredicted RBP16.22■□□□□ 0.19
LIMS1-201ENST00000332345 ANAPC15P60006 121 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 RTN1Q16799 776 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 ARRDC4Q8NCT1 418 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 BRF1Q92994 677 aa16.22■□□□□ 0.19
LIMS1-201ENST00000332345 MKI67P46013 3256 aaKnown RBP16.21■□□□□ 0.19
LIMS1-201ENST00000332345 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
LIMS1-201ENST00000332345 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 CFBP00751 764 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 RARBP10826 455 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 AKR1A1P14550 325 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
LIMS1-201ENST00000332345 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 TMTC3Q6ZXV5 915 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 NECAB2Q7Z6G3 386 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.19
LIMS1-201ENST00000332345 CCDC82Q8N4S0 544 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 TBC1D5Q92609 795 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
LIMS1-201ENST00000332345 ZHX1Q9UKY1 873 aaPredicted RBP16.21■□□□□ 0.19
LIMS1-201ENST00000332345 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 METAP2P50579 478 aaKnown RBP eCLIP16.2■□□□□ 0.186e-8■■■■■ 30.3
LIMS1-201ENST00000332345 UBE2Q1Q7Z7E8 422 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 MORC4Q8TE76 937 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 PAWRQ96IZ0 340 aaKnown RBP16.2■□□□□ 0.18
LIMS1-201ENST00000332345 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
LIMS1-201ENST00000332345 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
LIMS1-201ENST00000332345 SEC24BO95487 1268 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 PDE4DQ08499 809 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 CCDC144BQ3MJ40 725 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 ANO1Q5XXA6 986 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 IQSEC1Q6DN90 963 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 SYTL5Q8TDW5 730 aaPredicted RBP16.19■□□□□ 0.18
LIMS1-201ENST00000332345 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
LIMS1-201ENST00000332345 VTA1Q9NP79 307 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 ASTN1O14525 1302 aa16.19■□□□□ 0.18
LIMS1-201ENST00000332345 GCOM1H8Y6P7 765 aaPredicted RBP16.18■□□□□ 0.18
LIMS1-201ENST00000332345 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
LIMS1-201ENST00000332345 POLR2MP0CAP2 368 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 HSD17B4P51659 736 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 EVCP57679 992 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 GHRHRQ02643 423 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 ARHGEF16Q5VV41 709 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 TAAR1Q96RJ0 339 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 IWS1Q96ST2 819 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 RMDN3Q96TC7 470 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
LIMS1-201ENST00000332345 KATNBL1Q9H079 304 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
LIMS1-201ENST00000332345 KBTBD13C9JR72 458 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 DNM1LO00429 736 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 OPLAHO14841 1288 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 CDC27P30260 824 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
LIMS1-201ENST00000332345 TNFAIP2Q03169 654 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
LIMS1-201ENST00000332345 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 RNF180Q86T96 592 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 CUL5Q93034 780 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
LIMS1-201ENST00000332345 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
LIMS1-201ENST00000332345 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
LIMS1-201ENST00000332345 LCTP09848 1927 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
LIMS1-201ENST00000332345 EDNRBP24530 442 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 MNX1P50219 401 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 TOB2Q14106 344 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 ANKRD1Q15327 319 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 LRRC41Q15345 812 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 STXBP2Q15833 593 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 GJC2Q5T442 439 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 DIS3LQ8TF46 1054 aaKnown RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 DPF3Q92784 378 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 IL17RAQ96F46 866 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-201ENST00000332345 FRMPD3Q5JV73 1810 aa16.16■□□□□ 0.18
LIMS1-201ENST00000332345 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms