RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZBTB9Q96C00 473 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 EYA3Q99504 573 aa11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 NUP88Q99567 741 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF1-201ENST00000332296 LRRC10BA6NIK2 292 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 G3V3G9 751 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 H3BQF6 201 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 USP17L8P0C7I0 530 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 SLC35G1Q2M3R5 365 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 IRF2BP1Q8IU81 584 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 LRRC15Q8TF66 581 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 PBXIP1Q96AQ6 731 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 CRNKL1Q9BZJ0 848 aaKnown RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 TRIM10Q9UDY6 481 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 FER1L6Q2WGJ9 1857 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 CCDC151A5D8V7 595 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 STAT6P42226 847 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 GYS2P54840 703 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 AOC3Q16853 763 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 KIF4BQ2VIQ3 1234 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 BLIDQ8IZY5 108 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 CHP1Q99653 195 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 REXO2Q9Y3B8 237 aaKnown RBP11.3□□□□□ -0.6
PRAMEF1-201ENST00000332296 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 CTAGE9A4FU28 777 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 IL1R1P14778 569 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 KRT9P35527 623 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 LONP1P36776 959 aaKnown RBP11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 FAM193AP78312 1265 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 TMTC1Q8IUR5 882 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 PLIN2Q99541 437 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 USTQ9Y2C2 406 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 SCN9AQ15858 1988 aa11.29□□□□□ -0.6
PRAMEF1-201ENST00000332296 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 M0R2N6 131 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SPAG1Q07617 926 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 ARL6IP4Q66PJ3 421 aaKnown RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 MSANTD4Q8NCY6 345 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 NAPGQ99747 312 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 MCM9Q9NXL9 1143 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 MAP2K7O14733 419 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 KLRC4O43908 158 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 RHOXF2BP0C7M4 288 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 UBXN1Q04323 297 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 BRD3Q15059 726 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 BEND6Q5SZJ8 279 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 DHX37Q8IY37 1157 aaKnown RBP11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 PSMD1Q99460 953 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
PRAMEF1-201ENST00000332296 USP17L3A6NCW0 530 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 USP17L4A6NCW7 530 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 RFX1P22670 979 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 AMPD2Q01433 879 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 TFAP4Q01664 338 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 TRIM14Q14142 442 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 INF2Q27J81 1249 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 USP17L1Q7RTZ2 530 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 TMUB1Q9BVT8 246 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 RMND1Q9NWS8 449 aa11.27□□□□□ -0.6
PRAMEF1-201ENST00000332296 MAD2L2Q9UI95 211 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms