RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 ITGB8P26012 769 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
RAB28-202ENST00000330852 DUSP28Q4G0W2 176 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 C9orf50Q5SZB4 431 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 FBXO16Q8IX29 292 aaPredicted RBP21.19■□□□□ 0.98
RAB28-202ENST00000330852 UBAC1Q9BSL1 405 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 PDGFCQ9NRA1 345 aa21.19■□□□□ 0.98
RAB28-202ENST00000330852 RBM47A0AV96 593 aaKnown RBP21.18■□□□□ 0.98
RAB28-202ENST00000330852 RPS6P62753 249 aaKnown RBP21.18■□□□□ 0.98
RAB28-202ENST00000330852 SMAD3P84022 425 aaKnown RBP21.18■□□□□ 0.98
RAB28-202ENST00000330852 Q7L0L9 218 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 SLC43A3Q8NBI5 491 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 TNKSO95271 1327 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 GSPT1P15170 499 aaKnown RBP21.18■□□□□ 0.98
RAB28-202ENST00000330852 CALML3P27482 149 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 BEX3Q00994 111 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 MFSD5Q6N075 450 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 EEPD1Q7L9B9 569 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 FAM126BQ8IXS8 530 aa21.18■□□□□ 0.98
RAB28-202ENST00000330852 PURBQ96QR8 312 aaKnown RBP21.18■□□□□ 0.98
RAB28-202ENST00000330852 ABCB11O95342 1321 aa21.17■□□□□ 0.98
RAB28-202ENST00000330852 PARP1P09874 1014 aaKnown RBP21.17■□□□□ 0.98
RAB28-202ENST00000330852 GOLGA8HP0CJ92 632 aa21.17■□□□□ 0.98
RAB28-202ENST00000330852 CXCL17Q6UXB2 119 aa21.17■□□□□ 0.98
RAB28-202ENST00000330852 SLC30A10Q6XR72 485 aa21.17■□□□□ 0.98
RAB28-202ENST00000330852 NKRFO15226 690 aaKnown RBP eCLIP21.16■□□□□ 0.98
RAB28-202ENST00000330852 EDNRBP24530 442 aa21.16■□□□□ 0.98
RAB28-202ENST00000330852 PDE4DQ08499 809 aa21.16■□□□□ 0.98
RAB28-202ENST00000330852 TRDNQ13061 729 aa21.16■□□□□ 0.98
RAB28-202ENST00000330852 WDR11Q9BZH6 1224 aa21.16■□□□□ 0.98
RAB28-202ENST00000330852 UBA5Q9GZZ9 404 aa21.16■□□□□ 0.98
RAB28-202ENST00000330852 U3KPZ7 1027 aaPredicted RBP21.16■□□□□ 0.98
RAB28-202ENST00000330852 CD4P01730 458 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 PPIGQ13427 754 aaKnown RBP eCLIP21.15■□□□□ 0.985e-9■■■□□ 16.3
RAB28-202ENST00000330852 ITGA7Q13683 1181 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 CDC37Q16543 378 aaPredicted RBP21.15■□□□□ 0.98
RAB28-202ENST00000330852 IFIT1BQ5T764 474 aaKnown RBP21.15■□□□□ 0.98
RAB28-202ENST00000330852 ZNF697Q5TEC3 545 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 MCF2L2Q86YR7 1114 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 ADGRF4Q8IZF3 695 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 RNPC3Q96LT9 517 aaKnown RBP21.15■□□□□ 0.98
RAB28-202ENST00000330852 POLR3EQ9NVU0 708 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 CHMLP26374 656 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 CPT1AP50416 773 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 BRDTQ58F21 947 aaPredicted RBP21.15■□□□□ 0.98
RAB28-202ENST00000330852 TMEM199Q8N511 208 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 SCFD2Q8WU76 684 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 IL25Q9H293 177 aa21.15■□□□□ 0.98
RAB28-202ENST00000330852 DDX49Q9Y6V7 483 aaKnown RBP21.15■□□□□ 0.98
RAB28-202ENST00000330852 USH1GQ495M9 461 aa21.14■□□□□ 0.97
RAB28-202ENST00000330852 MRPL11Q9Y3B7 192 aaKnown RBP21.14■□□□□ 0.97
RAB28-202ENST00000330852 EPHB4P54760 987 aa21.13■□□□□ 0.97
RAB28-202ENST00000330852 SEC23AQ15436 765 aa21.13■□□□□ 0.97
RAB28-202ENST00000330852 KIAA1217Q5T5P2 1943 aa21.13■□□□□ 0.97
RAB28-202ENST00000330852 LAMA2P24043 3122 aaKnown RBP21.12■□□□□ 0.97
RAB28-202ENST00000330852 TMEM265A0A087WTH1 108 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 KPNA6O60684 536 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 PPP2R5BQ15173 497 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 FBXO11Q86XK2 927 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 SLC17A8Q8NDX2 589 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 CPVLQ9H3G5 476 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 DHX16O60231 1041 aaKnown RBP21.12■□□□□ 0.97
RAB28-202ENST00000330852 TRAF1Q13077 416 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 IWS1Q96ST2 819 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
RAB28-202ENST00000330852 COL6A3P12111 3177 aa21.11■□□□□ 0.97
RAB28-202ENST00000330852 GRIN2DO15399 1336 aa21.11■□□□□ 0.97
RAB28-202ENST00000330852 TMEM63BQ5T3F8 832 aa21.11■□□□□ 0.97
RAB28-202ENST00000330852 SAMD3Q8N6K7 520 aa21.11■□□□□ 0.97
RAB28-202ENST00000330852 NSUN6Q8TEA1 469 aaKnown RBP21.11■□□□□ 0.97
RAB28-202ENST00000330852 GPHNQ9NQX3 736 aaPredicted RBP21.11■□□□□ 0.97
RAB28-202ENST00000330852 MAP3K20Q9NYL2 800 aaKnown RBP21.11■□□□□ 0.97
RAB28-202ENST00000330852 SCN10AQ9Y5Y9 1956 aa21.11■□□□□ 0.97
RAB28-202ENST00000330852 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.1■□□□□ 0.97
RAB28-202ENST00000330852 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.1■□□□□ 0.97
RAB28-202ENST00000330852 ERICH2A1L162 156 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 SGSM2O43147 1006 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 CYP21A2P08686 494 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 TTLL4Q14679 1199 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 OR6J1Q8NGC5 347 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 AMNQ9BXJ7 453 aa21.1■□□□□ 0.97
RAB28-202ENST00000330852 KLRF2D3W0D1 207 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 PURAQ00577 322 aaKnown RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 SART3Q15020 963 aaKnown RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 PSRC1Q6PGN9 363 aaPredicted RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 CYB5R4Q7L1T6 521 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 RALYLQ86SE5 291 aaKnown RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 NCOA7Q8NI08 942 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 SYTL5Q8TDW5 730 aaPredicted RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 MTMR8Q96EF0 704 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 MTG1Q9BT17 334 aaPredicted RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 SEMA6BQ9H3T3 888 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 VAT1LQ9HCJ6 419 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 PALM3A6NDB9 673 aaPredicted RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 A6NJR5 290 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 SUPT20HL2P0C7V6 817 aa21.09■□□□□ 0.97
RAB28-202ENST00000330852 IRX6P78412 446 aaPredicted RBP21.09■□□□□ 0.97
RAB28-202ENST00000330852 GHRHRQ02643 423 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms