RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 KIAA0895Q8NCT3 520 aa11.24□□□□□ -0.61
RARB-201ENST00000330688 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
RARB-201ENST00000330688 BLOC1S4Q9NUP1 217 aa11.24□□□□□ -0.61
RARB-201ENST00000330688 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 SLC37A4O43826 429 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 BBOX1O75936 387 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 EIF6P56537 245 aaKnown RBP11.23□□□□□ -0.61
RARB-201ENST00000330688 GABPAQ06546 454 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 PICALMQ13492 652 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 MEA1Q16626 185 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 MIIPQ5JXC2 388 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
RARB-201ENST00000330688 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
RARB-201ENST00000330688 BICDL2A1A5D9 508 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 POLR3GO15318 223 aaPredicted RBP11.23□□□□□ -0.61
RARB-201ENST00000330688 AKR1B1P15121 316 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 ADRA2BP18089 450 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 GTF2IP78347 998 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 ST5P78524 1137 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 AMPD3Q01432 767 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 BRD3Q15059 726 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 MSANTD4Q8NCY6 345 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
RARB-201ENST00000330688 PNMA5Q96PV4 448 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
RARB-201ENST00000330688 CDK5RAP2Q96SN8 1893 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 MYMKA6NI61 221 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 TDP2O95551 362 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 MCM6Q14566 821 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 WHAMMP3Q1A5X7 153 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 CALML4Q96GE6 196 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 LRWD1Q9UFC0 647 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 MYO6Q9UM54 1294 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 TRIM21P19474 475 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 MTIF2P46199 727 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 CALCRLQ16602 461 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 NUDT12Q9BQG2 462 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 LY75O60449 1722 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 CTAGE15A4D2H0 777 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 ENC1O14682 589 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 MAP2K7O14733 419 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 RHOXF2BP0C7M4 288 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 CTAGE8P0CG41 777 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 SNHG28P0DPA3 235 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 ORC2Q13416 577 aaPredicted RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 BEND6Q5SZJ8 279 aaPredicted RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 DPP8Q6V1X1 898 aaPredicted RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 SV2BQ7L1I2 683 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 CTAGE6Q86UF2 777 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 CTAGE4Q8IX94 777 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 NOA1Q8NC60 698 aaKnown RBP11.22□□□□□ -0.61
RARB-201ENST00000330688 RHOXF2Q9BQY4 288 aa11.22□□□□□ -0.61
RARB-201ENST00000330688 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 POTEMA6NI47 508 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
RARB-201ENST00000330688 PSMD14O00487 310 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 OAS2P29728 719 aaKnown RBP11.21□□□□□ -0.61
RARB-201ENST00000330688 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
RARB-201ENST00000330688 ADCY7P51828 1080 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 ZBED6P86452 979 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 DDR1Q08345 913 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.61
RARB-201ENST00000330688 NUP58Q9BVL2 599 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 LACRTQ9GZZ8 138 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
RARB-201ENST00000330688 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
RARB-201ENST00000330688 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.62
RARB-201ENST00000330688 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.62
RARB-201ENST00000330688 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.62
RARB-201ENST00000330688 TRAPPC11Q7Z392 1133 aa11.21□□□□□ -0.62
RARB-201ENST00000330688 FAM114A1Q8IWE2 563 aa11.21□□□□□ -0.62
RARB-201ENST00000330688 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.62
RARB-201ENST00000330688 ERGIC2Q96RQ1 377 aa11.21□□□□□ -0.62
RARB-201ENST00000330688 PPP1R2P41236 205 aa11.2□□□□□ -0.62
RARB-201ENST00000330688 FAM193AP78312 1265 aa11.2□□□□□ -0.62
RARB-201ENST00000330688 TTBK2Q6IQ55 1244 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms