RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SCTRP47872 440 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 SOX10P56693 466 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 UBXN2AP68543 259 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L24Q0WX57 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 SMC5Q8IY18 1101 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 SDR42E1Q8WUS8 393 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 SOCS4Q8WXH5 440 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 STRBPQ96SI9 672 aaKnown RBP7.58□□□□□ -1.2
SMG1-201ENST00000330588 CRBNQ96SW2 442 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 ARMT1Q9H993 441 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 ZNF287Q9HBT7 754 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.58□□□□□ -1.2
SMG1-201ENST00000330588 RABGAP1Q9Y3P9 1069 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 GSG1L2A8MUP6 293 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 TNPO2O14787 897 aaKnown RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 HERVK_113P62684 666 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 POU4F2Q12837 409 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 CTR9Q6PD62 1173 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 CYP2U1Q7Z449 544 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 ANKRD13CQ8N6S4 541 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 MB21D1Q8N884 522 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 RAET1EQ8TD07 263 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 ARID3AQ99856 593 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 PUS7LQ9H0K6 701 aaKnown RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 RWDD1Q9H446 243 aaPredicted RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 OSBPL3Q9H4L5 887 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 SLC4A4Q9Y6R1 1079 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 PLIN4Q96Q06 1357 aa7.57□□□□□ -1.2
SMG1-201ENST00000330588 BAZ2AQ9UIF9 1905 aaKnown RBP7.57□□□□□ -1.2
SMG1-201ENST00000330588 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 USP17L21D6R901 530 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 VCAM1P19320 739 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 CDK8P49336 464 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 NT5C2P49902 561 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 CCNA1P78396 465 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 FOXK2Q01167 660 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 PRKCZQ05513 592 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 RAB3GAP1Q15042 981 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 CATSPERGQ6ZRH7 1159 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 GPRC5AQ8NFJ5 357 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 FEZ1Q99689 392 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 ALG2Q9H553 416 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 KANSL2Q9H9L4 492 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 ARHGEF10LQ9HCE6 1279 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 TMX2Q9Y320 296 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 ZMYM6O95789 1325 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 PLXNB2O15031 1838 aa7.56□□□□□ -1.2
SMG1-201ENST00000330588 PATL2C9JE40 543 aaKnown RBP7.55□□□□□ -1.2
SMG1-201ENST00000330588 WDR46O15213 610 aaKnown RBP7.55□□□□□ -1.2
SMG1-201ENST00000330588 GPAA1O43292 621 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 PRKAB2O43741 272 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 ADCY3O60266 1144 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 GJB1P08034 283 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
SMG1-201ENST00000330588 FLT3LGP49771 235 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 PDE1AP54750 535 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 ERVK-24P63145 666 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 SEPT2Q15019 361 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 SHCBP1Q8NEM2 672 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 USP6NLQ92738 828 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
SMG1-201ENST00000330588 NACAP1Q9BZK3 213 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 VCPKMTQ9H867 229 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 ENAMQ9NRM1 1142 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 HOXC10Q9NYD6 342 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 NYAP2Q9P242 653 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 RBPJLQ9UBG7 517 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 GJD2Q9UKL4 321 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 PARP14Q460N5 1801 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 RLFQ13129 1914 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 PCNTO95613 3336 aa7.55□□□□□ -1.2
SMG1-201ENST00000330588 HMGCRP04035 888 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 COPB2P35606 906 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 GJA8P48165 433 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ICA1Q05084 483 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 COG2Q14746 738 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ALX1Q15699 326 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SLC4A8Q2Y0W8 1093 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ANKRD45Q5TZF3 282 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 RIPOR1Q6ZS17 1223 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 UCN2Q96RP3 112 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 PAK6Q9NQU5 681 aaPredicted RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 HELLSQ9NRZ9 838 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 GABRQQ9UN88 632 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 IGKV6D-41A0A0C4DH26 115 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 A0A1W2PRG0 241 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SLC15A5A6NIM6 579 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 STRNO43815 780 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SLC3A2P08195 630 aaKnown RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 HOXC6P09630 235 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 CYP2D6P10635 497 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 CCL5P13501 91 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 AKR1B1P15121 316 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms