RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRIM11Q96F44 468 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF577Q9BSK1 485 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 SRPRBQ9Y5M8 271 aaKnown RBP12.58□□□□□ -0.4
COL4A5-201ENST00000328300 TXNDC16Q9P2K2 825 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 ABCB11O95342 1321 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 EPHA10Q5JZY3 1008 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 HDXQ7Z353 690 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
COL4A5-201ENST00000328300 ZSWIM5Q9P217 1185 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
COL4A5-201ENST00000328300 SLC26A4O43511 780 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 KIF11P52732 1056 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 IFT20Q8IY31 132 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 TRIM58Q8NG06 486 aa12.58□□□□□ -0.4
COL4A5-201ENST00000328300 CA8P35219 290 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 POLGP54098 1239 aaPredicted RBP12.57□□□□□ -0.4
COL4A5-201ENST00000328300 NELFCDQ8IXH7 590 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
COL4A5-201ENST00000328300 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 ECE2O60344 883 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 JAK3P52333 1124 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 CSF1RP07333 972 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 TNNI1P19237 187 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 LINC00301Q8NCQ3 95 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 PIGSQ96S52 555 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 FAM204AQ9H8W3 233 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 TDRD7Q8NHU6 1098 aaKnown RBP12.57□□□□□ -0.4
COL4A5-201ENST00000328300 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 PRKAB2O43741 272 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 POLR2BP30876 1174 aaKnown RBP12.57□□□□□ -0.4
COL4A5-201ENST00000328300 GJC1P36383 396 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 DPH6Q7L8W6 267 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 ZSWIM4Q9H7M6 989 aa12.57□□□□□ -0.4
COL4A5-201ENST00000328300 CLRN2A0PK11 232 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 PSAPP07602 524 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CFAP221Q4G0U5 840 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 C8orf74Q6P047 294 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF365Q70YC5 407 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 SLC7A3Q8WY07 619 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 UTP11Q9Y3A2 253 aaKnown RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 FAM169AQ9Y6X4 670 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 PSDA5PKW4 1024 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 FAM167AQ96KS9 214 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 HAUS4Q9H6D7 363 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 IFT122Q9HBG6 1241 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CD2APQ9Y5K6 639 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 FER1L4A9Z1Z3 1794 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 GRM4Q14833 912 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 WHAMMP3Q1A5X7 153 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 GBP1P32455 592 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 RPS6KA1Q15418 735 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 ARMCX5Q6P1M9 558 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 TAOK1Q7L7X3 1001 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 TBCKQ8TEA7 893 aa12.56□□□□□ -0.4
COL4A5-201ENST00000328300 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-201ENST00000328300 ADAM9Q13443 819 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 ANKS4BQ8N8V4 417 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 DPP9Q86TI2 863 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 MAPK8IP1Q9UQF2 711 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 RIPOR2Q9Y4F9 1068 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 ARHGAP23Q9P227 1491 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 ZBTB5O15062 677 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 RESTQ13127 1097 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 NFIXQ14938 502 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 XPO4Q9C0E2 1151 aaKnown RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 PSMC2P35998 433 aaKnown RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 NDUFA8P51970 172 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 MFAP3P55082 362 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 USP17L2Q6R6M4 530 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 SGMS1Q86VZ5 419 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms