RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■■□□ 15.5
TPM3-205ENST00000328159 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
TPM3-205ENST00000328159 AP3B2Q13367 1082 aa16.86■□□□□ 0.29
TPM3-205ENST00000328159 TMEM266Q2M3C6 531 aa16.86■□□□□ 0.29
TPM3-205ENST00000328159 USH1GQ495M9 461 aa16.86■□□□□ 0.29
TPM3-205ENST00000328159 ANO3Q9BYT9 981 aa16.86■□□□□ 0.29
TPM3-205ENST00000328159 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
TPM3-205ENST00000328159 ASTN2O75129 1339 aaPredicted RBP16.86■□□□□ 0.29
TPM3-205ENST00000328159 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
TPM3-205ENST00000328159 MEIS2O14770 477 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 FANCCQ00597 558 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
TPM3-205ENST00000328159 CHURC1Q8WUH1 139 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 PLIN2Q99541 437 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 XPO4Q9C0E2 1151 aaKnown RBP16.85■□□□□ 0.29
TPM3-205ENST00000328159 CUEDC2Q9H467 287 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 FANCLQ9NW38 375 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 IFNKQ9P0W0 207 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
TPM3-205ENST00000328159 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
TPM3-205ENST00000328159 PLA2G6O60733 806 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 PLCG1P19174 1290 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 TRAF1Q13077 416 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 GLIS2Q9BZE0 524 aaPredicted RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 RPN1P04843 607 aaKnown RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 MYL1P05976 194 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 USP11P51784 963 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 CCDC84Q86UT8 332 aaPredicted RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 CALML4Q96GE6 196 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 MMTAG2Q9BU76 263 aaKnown RBP16.84■□□□□ 0.29
TPM3-205ENST00000328159 RAB34Q9BZG1 259 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 KBTBD4Q9NVX7 518 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
TPM3-205ENST00000328159 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 FOSP01100 380 aaPredicted RBP16.83■□□□□ 0.28
TPM3-205ENST00000328159 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
TPM3-205ENST00000328159 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
TPM3-205ENST00000328159 PDIA5Q14554 519 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 TRMT44Q8IYL2 757 aaKnown RBP16.83■□□□□ 0.28
TPM3-205ENST00000328159 LRRC15Q8TF66 581 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 MED15Q96RN5 788 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
TPM3-205ENST00000328159 GINM1Q9NU53 330 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 FEM1BQ9UK73 627 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 SMCHD1A6NHR9 2005 aa16.83■□□□□ 0.28
TPM3-205ENST00000328159 CYP3A7-CYP3A51PA0A087WV96 503 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 H7C1D1 291 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 OPLAHO14841 1288 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 CYP3A7P24462 503 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 MOXD1Q6UVY6 613 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 HAS1Q92839 578 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 MBOAT7Q96N66 472 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 P2RX7Q99572 595 aaKnown RBP16.82■□□□□ 0.28
TPM3-205ENST00000328159 FEZ1Q99689 392 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 ZNF341Q9BYN7 854 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
TPM3-205ENST00000328159 SERPINC1P01008 464 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
TPM3-205ENST00000328159 CRYGNQ8WXF5 182 aa16.82■□□□□ 0.28
TPM3-205ENST00000328159 SYNRGQ9UMZ2 1314 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 MARCH6O60337 910 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 ZNF18P17022 549 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 UBASH3AP57075 661 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 ARHGAP4P98171 946 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 GRB10Q13322 594 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
TPM3-205ENST00000328159 KLHL10Q6JEL2 608 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 SPON1Q9HCB6 807 aa16.81■□□□□ 0.28
TPM3-205ENST00000328159 POTEMA6NI47 508 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 PIK3CDO00329 1044 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 SREBF1P36956 1147 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 SEMA3FQ13275 785 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 KCNB1Q14721 858 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 NBPF12Q5TAG4 269 aaPredicted RBP16.8■□□□□ 0.28
TPM3-205ENST00000328159 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
TPM3-205ENST00000328159 KLRC4O43908 158 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 LMNB1P20700 586 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 STX17P56962 302 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 LRMPQ12912 555 aa16.79■□□□□ 0.28
TPM3-205ENST00000328159 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms