RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
PRPF3-201ENST00000324862 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.381e-11■■■□□ 16.7
PRPF3-201ENST00000324862 ANO1Q5XXA6 986 aa17.46■□□□□ 0.38
PRPF3-201ENST00000324862 BICD2Q8TD16 824 aa17.46■□□□□ 0.38
PRPF3-201ENST00000324862 UIMC1Q96RL1 719 aa17.46■□□□□ 0.38
PRPF3-201ENST00000324862 MOV10L1Q9BXT6 1211 aaKnown RBP17.46■□□□□ 0.38
PRPF3-201ENST00000324862 TESPA1A2RU30 521 aaPredicted RBP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 FDX1P10109 184 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 RPS6P62753 249 aaKnown RBP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 LETM2Q2VYF4 491 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 MCM7P33993 719 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 OAZ1P54368 228 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 ZNF396Q96N95 335 aaPredicted RBP17.45■□□□□ 0.38
PRPF3-201ENST00000324862 PORCNQ9H237 461 aa17.45■□□□□ 0.38
PRPF3-201ENST00000324862 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
PRPF3-201ENST00000324862 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
PRPF3-201ENST00000324862 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
PRPF3-201ENST00000324862 LINC00301Q8NCQ3 95 aa17.44■□□□□ 0.38
PRPF3-201ENST00000324862 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
PRPF3-201ENST00000324862 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
PRPF3-201ENST00000324862 TDP2O95551 362 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 ERCC3P19447 782 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 BAATQ14032 418 aaPredicted RBP17.43■□□□□ 0.38
PRPF3-201ENST00000324862 PTPAQ15257 358 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 TTC38Q5R3I4 469 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
PRPF3-201ENST00000324862 A1CFQ9NQ94 594 aaKnown RBP17.43■□□□□ 0.38
PRPF3-201ENST00000324862 RTEL1Q9NZ71 1219 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 PNMA3Q9UL41 463 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 ERVK-9P63128 1117 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 ERVK-24P63145 666 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 SYTL5Q8TDW5 730 aaPredicted RBP17.43■□□□□ 0.38
PRPF3-201ENST00000324862 CAPNS2Q96L46 248 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 POLR3EQ9NVU0 708 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 CFAP45Q9UL16 551 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 A0A0G2JMZ2 1700 aa17.43■□□□□ 0.38
PRPF3-201ENST00000324862 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 HSD17B4P51659 736 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 GRIN1Q05586 938 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 WDR78Q5VTH9 848 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 RNF207Q6ZRF8 634 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 RIOX2Q8IUF8 465 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 GJA10Q969M2 543 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 RABGAP1Q9Y3P9 1069 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
PRPF3-201ENST00000324862 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
PRPF3-201ENST00000324862 STK38Q15208 465 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.42■□□□□ 0.38
PRPF3-201ENST00000324862 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
PRPF3-201ENST00000324862 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 TRAF1Q13077 416 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 TAF1CQ15572 869 aaPredicted RBP17.41■□□□□ 0.38
PRPF3-201ENST00000324862 IL31RAQ8NI17 732 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 CYP2W1Q8TAV3 490 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 NOL7Q9UMY1 257 aaKnown RBP17.41■□□□□ 0.38
PRPF3-201ENST00000324862 SLC37A4O43826 429 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 CLIC6Q96NY7 704 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 PARK7Q99497 189 aaKnown RBP17.41■□□□□ 0.38
PRPF3-201ENST00000324862 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
PRPF3-201ENST00000324862 MYH15Q9Y2K3 1946 aa17.41■□□□□ 0.38
PRPF3-201ENST00000324862 ARHGAP4P98171 946 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 PTGDRQ13258 359 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 SLC39A14Q15043 492 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 CRYGNQ8WXF5 182 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 SPTLC2O15270 562 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 PGK2P07205 417 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 EIF2AK2P19525 551 aaKnown RBP17.4■□□□□ 0.38
PRPF3-201ENST00000324862 ME1P48163 572 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 AP3B2Q13367 1082 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 MCF2L2Q86YR7 1114 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 GLT8D2Q9H1C3 349 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 PCDHA7Q9UN72 937 aa17.4■□□□□ 0.38
PRPF3-201ENST00000324862 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
PRPF3-201ENST00000324862 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
PRPF3-201ENST00000324862 GPRC5AQ8NFJ5 357 aa17.39■□□□□ 0.37
PRPF3-201ENST00000324862 ASTN1O14525 1302 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms