RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PLS1Q14651 629 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF202O95125 648 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 MSL3P1P0C860 447 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 GCFC2P16383 781 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CNOT10Q9H9A5 744 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 METTL14Q9HCE5 456 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CTNND2Q9UQB3 1225 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 IRS4O14654 1257 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 TNFAIP1Q13829 316 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CWF19L2Q2TBE0 894 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 MSL3Q8N5Y2 521 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ADCY7P51828 1080 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 GRIN1Q05586 938 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 PDE4DQ08499 809 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 KIF22Q14807 665 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ATP11BQ9Y2G3 1177 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 SAR1BQ9Y6B6 198 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 SYCE1LA8MT33 242 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 KCNA2P16389 499 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 C10orf76Q5T2E6 689 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 CFAP61Q8NHU2 1237 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 C19orf44Q9H6X5 657 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 STXBP3O00186 592 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 DAPK3O43293 454 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ADCK1Q86TW2 530 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 NDEL1Q9GZM8 345 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 UNC45AQ9H3U1 944 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ARPP21Q9UBL0 812 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 NOP56O00567 594 aaKnown RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF75DP51815 510 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 OLFML1Q6UWY5 402 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
COL12A1-201ENST00000322507 METTL22Q9BUU2 404 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-201ENST00000322507 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 MLPHQ9BV36 600 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 VAMP4O75379 141 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 GOLGA4Q13439 2230 aaKnown RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 A0A0B4J269 797 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 CCDC169A6NNP5 214 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TUBB3Q13509 450 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 SIRT1Q96EB6 747 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 SNAP25P60880 206 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 RIC8AQ9NPQ8 531 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 ASIC3Q9UHC3 531 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 HYOU1Q9Y4L1 999 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 CC2D2BQ6DHV5 1058 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 RNF14Q9UBS8 474 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 IGSF3O75054 1194 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 CATSPER1Q8NEC5 780 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 HGSO14964 777 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 EEF1B2P24534 225 aaKnown RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TUBA1BP68363 451 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TUBA1AQ71U36 451 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 FAM8A1Q9UBU6 413 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 EYA2O00167 538 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
COL12A1-201ENST00000322507 CYTH1Q15438 398 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 SESTD1Q86VW0 696 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 TRPA1O75762 1119 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 AMFRQ9UKV5 643 aa10.55□□□□□ -0.72
COL12A1-201ENST00000322507 RGS20O76081 388 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 EIF2S1P05198 315 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 DAB2P98082 770 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 TRMT10CQ7L0Y3 403 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 SERPINI1Q99574 410 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 ARHGAP26Q9UNA1 814 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 EFCAB8A8MWE9 144 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 MSR1P21757 451 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 POLR2BP30876 1174 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 M0QZ92 97 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 MFSD4BQ5TF39 518 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 TLDC2A0PJX2 215 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 PDE8AO60658 829 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 GJA8P48165 433 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 FANCCQ00597 558 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
COL12A1-201ENST00000322507 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
COL12A1-201ENST00000322507 IP6K1Q92551 441 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms