RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 KRT71Q3SY84 523 aa14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 MAPKAPK5Q8IW41 473 aa14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 BRIP1Q9BX63 1249 aa14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 NSRP1Q9H0G5 558 aaKnown RBP14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 NDST4Q9H3R1 872 aa14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 FAM237AA0A1B0GTK4 181 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 CTNNA1P35221 906 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 PRPHP41219 470 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 ERVK-24P63145 666 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 NNTQ13423 1086 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 RIN2Q8WYP3 895 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 FAM169AQ9Y6X4 670 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 GSTTP1A0A1W2PQM5 241 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 BMP6P22004 513 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 PICALMQ13492 652 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 TMEM51Q9NW97 253 aa14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 CTDP1Q9Y5B0 961 aaPredicted RBP14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-202ENST00000321117 RPL13P26373 211 aaKnown RBP14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 MAP2K2P36507 400 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 SARSP49591 514 aaKnown RBP14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 STXBP4Q6ZWJ1 553 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 WDR66Q8TBY9 1149 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 FLOT1O75955 427 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 E2F4Q16254 413 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 CUL5Q93034 780 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 UTP11Q9Y3A2 253 aaKnown RBP14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 PDCLQ13371 301 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 MTMR3Q13615 1198 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 SYCP3Q8IZU3 236 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 RNF14Q9UBS8 474 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 PTPROQ16827 1216 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 NT5DC1Q5TFE4 455 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 CDKAL1Q5VV42 579 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
DNMT3A-202ENST00000321117 PSMD14O00487 310 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 NMT2O60551 498 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 NEFHP12036 1026 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 SEPT7Q16181 437 aaKnown RBP14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 FAM26FQ5R3K3 315 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 MMS22LQ6ZRQ5 1243 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 HPCAL4Q9UM19 191 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 ZNF185O15231 689 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 GNA14O95837 355 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 KRT26Q7Z3Y9 468 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 ADSSL1Q8N142 457 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 EYA3Q99504 573 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 SAMD15Q9P1V8 674 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 RAB21Q9UL25 225 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 FTCDO95954 541 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 SMCR8Q8TEV9 937 aaPredicted RBP14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 MYCBPQ99417 103 aaPredicted RBP14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 STMN4Q9H169 189 aaPredicted RBP14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 MTRF1LQ9UGC7 380 aaKnown RBP14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 SWAP70Q9UH65 585 aa14.06□□□□□ -0.16
DNMT3A-202ENST00000321117 HLA-DOAP06340 250 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 EIF6P56537 245 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRC41Q15345 812 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 WDR93Q6P2C0 686 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 FAM217BQ9NTX9 383 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 NFU1Q9UMS0 254 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 EPB41P11171 864 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 SSR1P43307 286 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 IFT88Q13099 833 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 NFRKBQ6P4R8 1299 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 CCNI2Q6ZMN8 369 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 OSBPL9Q96SU4 736 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 KIF4AO95239 1232 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 KCNB1Q14721 858 aa14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-202ENST00000321117 LRRIQ3A6PVS8 624 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 KRIT1O00522 736 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 NR1D1P20393 614 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 FKBP3Q00688 224 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 HS2ST1Q7LGA3 356 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 SPATA4Q8NEY3 305 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 TFR2Q9UP52 801 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 TFRCP02786 760 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 VIMP08670 466 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 CCDC24Q8N4L8 307 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 TBCKQ8TEA7 893 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 NT5C3AQ9H0P0 336 aa14.04□□□□□ -0.16
DNMT3A-202ENST00000321117 SNX12Q9UMY4 172 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms