RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 SLC30A9Q6PML9 568 aa8.8□□□□□ -1
RTL3-201ENST00000321110 CCHCR1Q8TD31 782 aa8.8□□□□□ -1
RTL3-201ENST00000321110 CNKSR1Q969H4 720 aa8.8□□□□□ -1
RTL3-201ENST00000321110 MTRQ99707 1265 aa8.8□□□□□ -1
RTL3-201ENST00000321110 TLR10Q9BXR5 811 aa8.8□□□□□ -1
RTL3-201ENST00000321110 TSGA10Q9BZW7 698 aa8.8□□□□□ -1
RTL3-201ENST00000321110 PUS7LQ9H0K6 701 aaKnown RBP8.8□□□□□ -1
RTL3-201ENST00000321110 DDX21Q9NR30 783 aaKnown RBP eCLIP8.8□□□□□ -1
RTL3-201ENST00000321110 SALL4Q9UJQ4 1053 aa8.8□□□□□ -1
RTL3-201ENST00000321110 GDAQ9Y2T3 454 aa8.8□□□□□ -1
RTL3-201ENST00000321110 STK36Q9NRP7 1315 aa8.8□□□□□ -1
RTL3-201ENST00000321110 PDS5AQ29RF7 1337 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 GOLGA6L10A6NI86 522 aa8.79□□□□□ -1
RTL3-201ENST00000321110 NUTM2BA6NNL0 878 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 NUTM2EB1AL46 878 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 LIN7AO14910 233 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 ORC4O43929 436 aa8.79□□□□□ -1
RTL3-201ENST00000321110 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 PYGLP06737 847 aa8.79□□□□□ -1
RTL3-201ENST00000321110 ALADP13716 330 aa8.79□□□□□ -1
RTL3-201ENST00000321110 HSD17B3P37058 310 aa8.79□□□□□ -1
RTL3-201ENST00000321110 PPP2R2AP63151 447 aa8.79□□□□□ -1
RTL3-201ENST00000321110 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 SF3A3Q12874 501 aaKnown RBP eCLIP8.79□□□□□ -1
RTL3-201ENST00000321110 ZNF268Q14587 947 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 SLMAPQ14BN4 828 aa8.79□□□□□ -1
RTL3-201ENST00000321110 SAFBQ15424 915 aaKnown RBP eCLIP8.79□□□□□ -1
RTL3-201ENST00000321110 PDCD2Q16342 344 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 CWF19L1Q69YN2 538 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
RTL3-201ENST00000321110 CPLX4Q7Z7G2 160 aa8.79□□□□□ -1
RTL3-201ENST00000321110 WHAMMQ8TF30 809 aa8.79□□□□□ -1
RTL3-201ENST00000321110 FAM167BQ9BTA0 163 aa8.79□□□□□ -1
RTL3-201ENST00000321110 FOXP1Q9H334 677 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 CABP5Q9NP86 173 aa8.79□□□□□ -1
RTL3-201ENST00000321110 EID1Q9Y6B2 187 aa8.79□□□□□ -1
RTL3-201ENST00000321110 LTN1O94822 1766 aa8.79□□□□□ -1
RTL3-201ENST00000321110 B4DLN1 442 aa8.79□□□□□ -1
RTL3-201ENST00000321110 WNT7AO00755 349 aa8.79□□□□□ -1
RTL3-201ENST00000321110 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 MAP3K13O43283 966 aa8.79□□□□□ -1
RTL3-201ENST00000321110 MYBL1P10243 752 aa8.79□□□□□ -1
RTL3-201ENST00000321110 PMS1P54277 932 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 NEXNQ0ZGT2 675 aa8.79□□□□□ -1
RTL3-201ENST00000321110 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 LRIG3Q6UXM1 1119 aa8.79□□□□□ -1
RTL3-201ENST00000321110 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
RTL3-201ENST00000321110 SPICE1Q8N0Z3 855 aa8.79□□□□□ -1
RTL3-201ENST00000321110 PRCCQ92733 491 aaPredicted RBP8.79□□□□□ -1
RTL3-201ENST00000321110 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 IFIH1Q9BYX4 1025 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 ZNHIT6Q9NWK9 470 aaKnown RBP8.79□□□□□ -1
RTL3-201ENST00000321110 AGAP1Q9UPQ3 857 aa8.79□□□□□ -1
RTL3-201ENST00000321110 ZPR1O75312 459 aa8.78□□□□□ -1
RTL3-201ENST00000321110 TRIM21P19474 475 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 ATP4AP20648 1035 aa8.78□□□□□ -1
RTL3-201ENST00000321110 ECHS1P30084 290 aa8.78□□□□□ -1
RTL3-201ENST00000321110 PRCPP42785 496 aa8.78□□□□□ -1
RTL3-201ENST00000321110 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
RTL3-201ENST00000321110 PAPOLAP51003 745 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 HSPA2P54652 639 aa8.78□□□□□ -1
RTL3-201ENST00000321110 ZBED6P86452 979 aa8.78□□□□□ -1
RTL3-201ENST00000321110 FKBP4Q02790 459 aaKnown RBP eCLIP8.78□□□□□ -1
RTL3-201ENST00000321110 SPA17Q15506 151 aa8.78□□□□□ -1
RTL3-201ENST00000321110 MFN1Q8IWA4 741 aa8.78□□□□□ -1
RTL3-201ENST00000321110 IGDCC4Q8TDY8 1250 aa8.78□□□□□ -1
RTL3-201ENST00000321110 KRT12Q99456 494 aa8.78□□□□□ -1
RTL3-201ENST00000321110 LY9Q9HBG7 655 aa8.78□□□□□ -1
RTL3-201ENST00000321110 LRRC4CQ9HCJ2 640 aa8.78□□□□□ -1
RTL3-201ENST00000321110 ZFATQ9P243 1243 aa8.78□□□□□ -1
RTL3-201ENST00000321110 CEP131Q9UPN4 1083 aa8.78□□□□□ -1
RTL3-201ENST00000321110 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
RTL3-201ENST00000321110 B4E1Z4 1266 aa8.78□□□□□ -1
RTL3-201ENST00000321110 H7C1D1 291 aa8.78□□□□□ -1
RTL3-201ENST00000321110 USO1O60763 962 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 KIF4AO95239 1232 aa8.78□□□□□ -1
RTL3-201ENST00000321110 GSTA1P08263 222 aa8.78□□□□□ -1
RTL3-201ENST00000321110 SRGNP10124 158 aa8.78□□□□□ -1
RTL3-201ENST00000321110 GNAT1P11488 350 aa8.78□□□□□ -1
RTL3-201ENST00000321110 NEFHP12036 1026 aa8.78□□□□□ -1
RTL3-201ENST00000321110 MYL6BP14649 208 aa8.78□□□□□ -1
RTL3-201ENST00000321110 KCNJ2P63252 427 aa8.78□□□□□ -1
RTL3-201ENST00000321110 GNPTABQ3T906 1256 aa8.78□□□□□ -1
RTL3-201ENST00000321110 EARS2Q5JPH6 523 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 KLHDC7AQ5VTJ3 777 aa8.78□□□□□ -1
RTL3-201ENST00000321110 NFXL1Q6ZNB6 911 aa8.78□□□□□ -1
RTL3-201ENST00000321110 ERICH1Q86X53 443 aa8.78□□□□□ -1
RTL3-201ENST00000321110 ANKRD13CQ8N6S4 541 aa8.78□□□□□ -1
RTL3-201ENST00000321110 CCDC197Q8NCU1 140 aa8.78□□□□□ -1
RTL3-201ENST00000321110 CCDC42Q96M95 316 aa8.78□□□□□ -1
RTL3-201ENST00000321110 METTL22Q9BUU2 404 aaPredicted RBP8.78□□□□□ -1
RTL3-201ENST00000321110 PAPOLBQ9NRJ5 636 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 NOVA2Q9UNW9 492 aaKnown RBP8.78□□□□□ -1
RTL3-201ENST00000321110 TBX22Q9Y458 520 aa8.78□□□□□ -1
RTL3-201ENST00000321110 PXDNQ92626 1479 aa8.77□□□□□ -1
RTL3-201ENST00000321110 ARHGAP23Q9P227 1491 aa8.77□□□□□ -1
RTL3-201ENST00000321110 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
RTL3-201ENST00000321110 IFNAR1P17181 557 aa8.77□□□□□ -1.01
RTL3-201ENST00000321110 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
RTL3-201ENST00000321110 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms