RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 EHHADHQ08426 723 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 E2F5Q15329 346 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 MAATS1Q7Z4T9 603 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 TXNRD3Q86VQ6 643 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 NELFCDQ8IXH7 590 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPGR-201ENST00000318842 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 KCNG1Q9UIX4 513 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 SNX12Q9UMY4 172 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 EIF3HO15372 352 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPGR-201ENST00000318842 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
RPGR-201ENST00000318842 IL2RBP14784 551 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 TXKP42681 527 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 HSPA2P54652 639 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
RPGR-201ENST00000318842 CTCFLQ8NI51 663 aaPredicted RBP10.7□□□□□ -0.7
RPGR-201ENST00000318842 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
RPGR-201ENST00000318842 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 NPHP3-ACAD11A0A0J9YXS1 232 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 POTEMA6NI47 508 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 LRRC10BA6NIK2 292 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 CCNT1O60563 726 aaKnown RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 PDE8AO60658 829 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 XBP1P17861 261 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 GRIK5Q16478 980 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 QPCTQ16769 361 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 CT47A1Q5JQC4 288 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 C4orf32Q8N8J7 132 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 FERMT2Q96AC1 680 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 RUFY1Q96T51 708 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 UBA5Q9GZZ9 404 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPGR-201ENST00000318842 COL1A1P02452 1464 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 MYH7P12883 1935 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 MYH6P13533 1939 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 CLGNO14967 610 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 PRPF3O43395 683 aaKnown RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 CYTH3O43739 400 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 SKAP2O75563 359 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 HEXIM1O94992 359 aaKnown RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 C8orf74Q6P047 294 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 TTYH3Q9C0H2 523 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 ACBD3Q9H3P7 528 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 SLIT2O94813 1529 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 E7EVH7 732 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 UPP2O95045 317 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 UQCRFS1P1P0C7P4 283 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 SCP2P22307 547 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 FECHP22830 423 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 HLTFQ14527 1009 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPGR-201ENST00000318842 SPA17Q15506 151 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 SLC30A10Q6XR72 485 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 DTHD1Q6ZMT9 781 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 MMS22LQ6ZRQ5 1243 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 KCNK18Q7Z418 384 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 CEP57Q86XR8 500 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 EFCAB13Q8IY85 973 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 RIOK1Q9BRS2 568 aaKnown RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
RPGR-201ENST00000318842 ZNHIT6Q9NWK9 470 aaKnown RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 CHORDC1Q9UHD1 332 aaPredicted RBP10.69□□□□□ -0.7
RPGR-201ENST00000318842 SLIT3O75094 1523 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 PDS5AQ29RF7 1337 aaKnown RBP10.68□□□□□ -0.7
RPGR-201ENST00000318842 CCDC194A0A1B0GVG4 234 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 FOXO6A8MYZ6 492 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 RPS6KA5O75582 802 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 PALMO75781 387 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 SRGNP10124 158 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 ACTN1P12814 892 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 TAL1P17542 331 aaPredicted RBP10.68□□□□□ -0.7
RPGR-201ENST00000318842 DDX60Q8IY21 1712 aaKnown RBP10.68□□□□□ -0.7
RPGR-201ENST00000318842 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 MDM1Q8TC05 714 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 CCDC51Q96ER9 411 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 ZHX3Q9H4I2 956 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 CHD4Q14839 1912 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 A0A087WUV0 522 aaPredicted RBP10.68□□□□□ -0.7
RPGR-201ENST00000318842 PSMA7O14818 248 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 TFAP4Q01664 338 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 DHX9Q08211 1270 aaKnown RBP10.68□□□□□ -0.7
RPGR-201ENST00000318842 CEP85LQ5SZL2 805 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 POTEDQ86YR6 584 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 CASKIN2Q8WXE0 1202 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 NEUROG2Q9H2A3 272 aa10.68□□□□□ -0.7
RPGR-201ENST00000318842 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 FER1L4A9Z1Z3 1794 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 RAD21O60216 631 aa10.67□□□□□ -0.7
RPGR-201ENST00000318842 STARD3NLO95772 234 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms