RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 SYCE1Q8N0S2 351 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 NUCKS1Q9H1E3 243 aaKnown RBP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 PLIN2Q99541 437 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CAPS2Q9BXY5 557 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
HNF4A-201ENST00000316099 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
HNF4A-201ENST00000316099 C21orf2O43822 256 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 APBA1Q02410 837 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 NR5A1Q13285 461 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 KIF3CO14782 793 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 CHRNA5P30532 468 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 LRMPQ12912 555 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 DLGAP5Q15398 846 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 SGMS1Q86VZ5 419 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 SLF1Q9BQI6 1058 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 RGL2O15211 777 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
HNF4A-201ENST00000316099 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 FOXP1Q9H334 677 aaPredicted RBP11.88□□□□□ -0.51
HNF4A-201ENST00000316099 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 PHLPP2Q6ZVD8 1323 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 TMED8Q6PL24 325 aaPredicted RBP11.88□□□□□ -0.51
HNF4A-201ENST00000316099 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 TAB2Q9NYJ8 693 aa11.88□□□□□ -0.51
HNF4A-201ENST00000316099 TRAF5O00463 557 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 MAP7D1Q3KQU3 841 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PNMA8AQ86V59 439 aaPredicted RBP11.87□□□□□ -0.51
HNF4A-201ENST00000316099 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 MAGEA1P43355 309 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 AOC3Q16853 763 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 CCDC38Q502W7 563 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 MIPOL1Q8TD10 442 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PGBD1Q96JS3 809 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 RAB3IPQ96QF0 476 aaPredicted RBP11.87□□□□□ -0.51
HNF4A-201ENST00000316099 NDC80O14777 642 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PRPF3O43395 683 aaKnown RBP11.87□□□□□ -0.51
HNF4A-201ENST00000316099 GJC1P36383 396 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PNOCQ13519 176 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 EFCAB13Q8IY85 973 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 CERKLQ49MI3 558 aaPredicted RBP11.87□□□□□ -0.51
HNF4A-201ENST00000316099 IMPG2Q9BZV3 1241 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 ECE2O60344 883 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 CMA1P23946 247 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 SLC1A4P43007 532 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 SP4Q02446 784 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 VSIG1Q86XK7 387 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
HNF4A-201ENST00000316099 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
HNF4A-201ENST00000316099 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 TNFAIP3P21580 790 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CALUO43852 315 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RABEP2Q9H5N1 569 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.516e-8■■■□□ 18.3
HNF4A-201ENST00000316099 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CRKP46108 304 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RASSF2P50749 326 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 DCAF17Q5H9S7 520 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RAD17O75943 681 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CACNB3P54284 484 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 RPS6KA1Q15418 735 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 CCDC84Q86UT8 332 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 KIFAP3Q92845 792 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
HNF4A-201ENST00000316099 FRMD4BQ9Y2L6 1034 aa11.86□□□□□ -0.51
HNF4A-201ENST00000316099 HYOU1Q9Y4L1 999 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms