RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TRERF1Q96PN7 1200 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 MMP19Q99542 508 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 AGXT2Q9BYV1 514 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 MROH8Q9H579 483 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
CDC42-201ENST00000315554 GJD2Q9UKL4 321 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 PCDHGA4Q9Y5G9 962 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 SLC15A5A6NIM6 579 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 NFIBO00712 420 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 COBLO75128 1261 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 FDX1P10109 184 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 FCER1AP12319 257 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 PDIA3P30101 505 aaKnown RBP9.12□□□□□ -0.95
CDC42-201ENST00000315554 ADD1P35611 737 aaKnown RBP9.12□□□□□ -0.95
CDC42-201ENST00000315554 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
CDC42-201ENST00000315554 OAZ1P54368 228 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 TRIM32Q13049 653 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 GRB14Q14449 540 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 KCTD2Q14681 263 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 FBXO11Q86XK2 927 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 NPLOC4Q8TAT6 608 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 RIOX1Q9H6W3 641 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
CDC42-201ENST00000315554 DDX49Q9Y6V7 483 aaKnown RBP9.12□□□□□ -0.95
CDC42-201ENST00000315554 PLXNB2O15031 1838 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 ZBTB5O15062 677 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 ADCY3O60266 1144 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 LARGE1O95461 756 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 GNRH1P01148 92 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 RGS2P41220 211 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 GNAQP50148 359 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 DPP9Q86TI2 863 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
CDC42-201ENST00000315554 ANKRD35Q8N283 1001 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 CHST13Q8NET6 341 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 USP6NLQ92738 828 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 MTMR8Q96EF0 704 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 IL17RAQ96F46 866 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 DDX11Q96FC9 970 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 TBC1D32Q96NH3 1257 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
CDC42-201ENST00000315554 MAP3K14Q99558 947 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 ACAD9Q9H845 621 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 A1CFQ9NQ94 594 aaKnown RBP9.11□□□□□ -0.95
CDC42-201ENST00000315554 FLRT1Q9NZU1 646 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 BIN2Q9UBW5 565 aaPredicted RBP9.11□□□□□ -0.95
CDC42-201ENST00000315554 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 BAZ2BQ9UIF8 2168 aaKnown RBP9.11□□□□□ -0.95
CDC42-201ENST00000315554 DOCK3Q8IZD9 2030 aa9.11□□□□□ -0.95
CDC42-201ENST00000315554 PTPDC1A2A3K4 754 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 GRK4P32298 578 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 COPB2P35606 906 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 CNTN2Q02246 1040 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 PKN2Q16513 984 aaKnown RBP9.1□□□□□ -0.95
CDC42-201ENST00000315554 TKFCQ3LXA3 575 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 SLC30A10Q6XR72 485 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 FBXL16Q8N461 479 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 NECAB1Q8N987 351 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 SOCS4Q8WXH5 440 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 CLEC4DQ8WXI8 215 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 TRIB2Q92519 343 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.952e-6■■□□□ 13.7
CDC42-201ENST00000315554 PHKBQ93100 1093 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
CDC42-201ENST00000315554 APBA2Q99767 749 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 LZTS2Q9BRK4 669 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 RBM28Q9NW13 759 aaKnown RBP9.1□□□□□ -0.95
CDC42-201ENST00000315554 FBXO40Q9UH90 709 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 SMCHD1A6NHR9 2005 aa9.1□□□□□ -0.95
CDC42-201ENST00000315554 PNMA6FA0A0J9YX94 578 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 STRNO43815 780 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 INHAP05111 366 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 CALML3P27482 149 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 PRMT2P55345 433 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 EVCP57679 992 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 FUT2Q10981 343 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 BAATQ14032 418 aaPredicted RBP9.09□□□□□ -0.95
CDC42-201ENST00000315554 HEATR3Q7Z4Q2 680 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 ABHD8Q96I13 439 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 AMNQ9BXJ7 453 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 SLC26A6Q9BXS9 759 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 SLKQ9H2G2 1235 aaPredicted RBP9.09□□□□□ -0.95
CDC42-201ENST00000315554 SEC63Q9UGP8 760 aaKnown RBP9.09□□□□□ -0.95
CDC42-201ENST00000315554 V9GY48 417 aaPredicted RBP9.09□□□□□ -0.95
CDC42-201ENST00000315554 ABCB11O95342 1321 aa9.09□□□□□ -0.95
CDC42-201ENST00000315554 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 OPLAHO14841 1288 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 CYP2C19P33261 490 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 RCAN1P53805 252 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 SCRN1Q12765 414 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 IRF5Q13568 498 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 MTFR1Q15390 333 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 ME3Q16798 604 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms