RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 INTUQ9ULD6 942 aa10.22□□□□□ -0.77
BDNF-201ENST00000314915 ZNF711Q9Y462 761 aa10.22□□□□□ -0.77
BDNF-201ENST00000314915 ANKRD62A6NC57 917 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 CLASP2O75122 1294 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 SERPINB4P48594 390 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 TUBA3CQ13748 450 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 CFAP58Q5T655 872 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 GRAMD2AQ8IUY3 354 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 RNF25Q96BH1 459 aaPredicted RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 CEP295NLQ96MC4 621 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 SAP30BPQ9UHR5 308 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 NPATQ14207 1427 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 GIGYF1O75420 1035 aaPredicted RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 PARNO95453 639 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 NQO1P15559 274 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 CCNCP24863 283 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 RBM46Q8TBY0 533 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 GIPC2Q8TF65 315 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 CCDC42Q96M95 316 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 WWC3Q9ULE0 1092 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 FAM32AQ9Y421 112 aaKnown RBP10.21□□□□□ -0.77
BDNF-201ENST00000314915 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.77
BDNF-201ENST00000314915 POTEJP0CG39 1038 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 HPCAP84074 193 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 TTMPQ5BVD1 217 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.21□□□□□ -0.78
BDNF-201ENST00000314915 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.21□□□□□ -0.78
BDNF-201ENST00000314915 ITPKCQ96DU7 683 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 CENPKQ9BS16 269 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SLC12A4Q9UP95 1085 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SCG2P13521 617 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 UBASH3AP57075 661 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 EMBQ6PCB8 327 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.78
BDNF-201ENST00000314915 VSTM4Q8IW00 320 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 MLKLQ8NB16 471 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 ATP8B4Q8TF62 1192 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SSH1Q8WYL5 1049 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 PANX2Q96RD6 677 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 ABCF3Q9NUQ8 709 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.21□□□□□ -0.78
BDNF-201ENST00000314915 FKBP14Q9NWM8 211 aa10.21□□□□□ -0.78
BDNF-201ENST00000314915 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.21□□□□□ -0.78
BDNF-201ENST00000314915 MAGEA13PA6NCF6 341 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 PRPF3O43395 683 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 TBL3Q12788 808 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 FKBP15Q5T1M5 1219 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 TMEM139Q8IV31 216 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 AENQ8WTP8 325 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 PPANQ9NQ55 473 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.2□□□□□ -0.78
BDNF-201ENST00000314915 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 TGFB3P10600 412 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 TUFMP49411 452 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 CYLC2Q14093 348 aaPredicted RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 RASA2Q15283 850 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 CNPY1Q3B7I2 92 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 SPERTQ8NA61 448 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 SPATA16Q9BXB7 569 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 FANCAO15360 1455 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 EIF4E1BA6NMX2 242 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 MATN2O00339 956 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 TMED10P49755 219 aaKnown RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 SPRED3Q2MJR0 410 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 CCDC197Q8NCU1 140 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 ARL8AQ96BM9 186 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
BDNF-201ENST00000314915 TMCC3Q9ULS5 477 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 ITIH6Q6UXX5 1313 aa10.2□□□□□ -0.78
BDNF-201ENST00000314915 IKBKBO14920 756 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 MAP3K7O43318 606 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 SERPINC1P01008 464 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 EIF2S1P05198 315 aaKnown RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 ZNF362Q5T0B9 420 aaPredicted RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 LONP2Q86WA8 852 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 RRP36Q96EU6 259 aaKnown RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 TPK1Q9H3S4 243 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 KCNMB3Q9NPA1 279 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 ARHGEF38Q9NXL2 777 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 KIAA1522Q9P206 1035 aaPredicted RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 PCSK1NQ9UHG2 260 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 PABPN1LA6NDY0 278 aaKnown RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 LGR5O75473 907 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 CPA3P15088 417 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 SARSP49591 514 aaKnown RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 EPHB4P54760 987 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 NDUFA5Q16718 116 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
BDNF-201ENST00000314915 SAMD14Q8IZD0 417 aaPredicted RBP10.19□□□□□ -0.78
BDNF-201ENST00000314915 SPATA17Q96L03 361 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms