RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TDP2O95551 362 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 GYS1P13807 737 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 RASA1P20936 1047 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 SLC35F6Q8N357 371 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 ACRBPQ8NEB7 543 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 OGFRQ9NZT2 677 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 PCDHA6Q9UN73 950 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 PCDHA8Q9Y5H6 950 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 USP37Q86T82 979 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 MYOM1P52179 1685 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 BUB1O43683 1085 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 IFFO1Q0D2I5 559 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 TMOD4Q9NZQ9 345 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 PNMA6FA0A0J9YX94 578 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 MYCNP04198 464 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 EN1Q05925 392 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 FMR1Q06787 632 aaKnown RBP eCLIP6.86□□□□□ -1.315e-8■■■■■ 29.5
PRKDC-201ENST00000314191 NTRK3Q16288 839 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 TBC1D10BQ4KMP7 808 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 CCDC93Q567U6 631 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 TEKT3Q9BXF9 490 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 KDM3AQ9Y4C1 1321 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 NEFHP12036 1026 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 NAA30Q147X3 362 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 BARHL2Q9NY43 387 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 CCPG1Q9ULG6 757 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 ENC1O14682 589 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 ZNF277Q9NRM2 450 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 POTEMA6NI47 508 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 ATP2C1P98194 919 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 SYDE2Q5VT97 1194 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 POTEDQ86YR6 584 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 GJA10Q969M2 543 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 DHTKD1Q96HY7 919 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 FUCA2Q9BTY2 467 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 LSM14BQ9BX40 385 aaKnown RBP6.86□□□□□ -1.31
PRKDC-201ENST00000314191 TUBE1Q9UJT0 475 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 MCTP2Q6DN12 878 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 CNTNAP4Q9C0A0 1308 aa6.86□□□□□ -1.31
PRKDC-201ENST00000314191 PTPROQ16827 1216 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ARMCX3Q9UH62 379 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 SPATA31A6Q5VVP1 1343 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 CLIC2O15247 247 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 SFMBT2Q5VUG0 894 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 HAUS4Q9H6D7 363 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 VPS18Q9P253 973 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 U2AF1L4Q8WU68 220 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 LARSQ9P2J5 1176 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 RABGAP1Q9Y3P9 1069 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ARHGEF28Q8N1W1 1705 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 KRT31Q15323 416 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 PAGR1Q9BTK6 254 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 PLEKHG2Q9H7P9 1386 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ZBTB5O15062 677 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 TNFAIP3P21580 790 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 QRICH1Q2TAL8 776 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 NBPF11Q86T75 865 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 GDAP1L1Q96MZ0 367 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 IFIH1Q9BYX4 1025 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 CUEDC2Q9H467 287 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 EMILIN3Q9NT22 766 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ATP6V0A2Q9Y487 856 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 COL4A3BPQ9Y5P4 624 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 BIRC3Q13489 604 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 DDX12PQ92771 950 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 BHMT2Q9H2M3 363 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 RIC8AQ9NPQ8 531 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 CEP104O60308 925 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 GCFC2P16383 781 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 RDXP35241 583 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 PTPAQ15257 358 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 DNAJC21Q5F1R6 531 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 F5H6K3 240 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 EEF1GP26641 437 aaKnown RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 SETQ01105 290 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-201ENST00000314191 KLRC3Q07444 240 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 TMEM179Q6ZVK1 233 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ADGRF4Q8IZF3 695 aa6.85□□□□□ -1.31
PRKDC-201ENST00000314191 ARMCX5Q6P1M9 558 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 MTMR4Q9NYA4 1195 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 SEC23AQ15436 765 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 SELENOOQ9BVL4 669 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 NDST4Q9H3R1 872 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 CFAP65Q6ZU64 1925 aaKnown RBP6.84□□□□□ -1.31
PRKDC-201ENST00000314191 NF2P35240 595 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 NLRX1Q86UT6 975 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 SLFN12Q8IYM2 578 aa6.84□□□□□ -1.31
PRKDC-201ENST00000314191 NR2F2P24468 414 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms