RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PWP2Q15269 919 aaKnown RBP17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 RNF180Q86T96 592 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 MAF1Q9H063 256 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 MCM3APO60318 1980 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 CALML3P27482 149 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 BMP8BP34820 402 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 MYL10Q9BUA6 226 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 VTA1Q9NP79 307 aa17.02■□□□□ 0.31
PPP1CA-201ENST00000312989 ZBTB5O15062 677 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 KCNA10Q16322 511 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 ADCK5Q3MIX3 580 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 DNERQ8NFT8 737 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 KCNB2Q92953 911 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 PIGSQ96S52 555 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 PDLIM7Q9NR12 457 aa17.01■□□□□ 0.31
PPP1CA-201ENST00000312989 MOXD2PA6NHM9 499 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 ITGB8P26012 769 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 HSD17B4P51659 736 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 EXOSC10Q01780 885 aaKnown RBP17■□□□□ 0.31
PPP1CA-201ENST00000312989 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 FBXO11Q86XK2 927 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 ZNF654Q8IZM8 581 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 MAP3K14Q99558 947 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
PPP1CA-201ENST00000312989 ATP11BQ9Y2G3 1177 aa17■□□□□ 0.31
PPP1CA-201ENST00000312989 A0A1W2PPC1 479 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 TRIM43BA6NCK2 446 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 DDAH1O94760 285 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 ASGR1P07306 291 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 C6orf222P0C671 652 aaPredicted RBP16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 MCM5P33992 734 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 LIFRP42702 1097 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 CDK7P50613 346 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 BEX3Q00994 111 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 TLK2Q86UE8 772 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 TRIM43Q96BQ3 446 aaPredicted RBP16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 LAMA2P24043 3122 aaKnown RBP16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 LTBP2Q14767 1821 aa16.99■□□□□ 0.31
PPP1CA-201ENST00000312989 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 ERICH2A1L162 156 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 SOX1O00570 391 aaPredicted RBP16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 ARIH2O95376 493 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 TLE2Q04725 743 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 DUSP28Q4G0W2 176 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 IQSEC1Q6DN90 963 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 CATIPQ7Z7H3 387 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 SGMS1Q86VZ5 419 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 Q9Y3F1 56 aa16.98■□□□□ 0.31
PPP1CA-201ENST00000312989 DHX16O60231 1041 aaKnown RBP16.97■□□□□ 0.31
PPP1CA-201ENST00000312989 PLEKHA8P1O95397 391 aa16.97■□□□□ 0.31
PPP1CA-201ENST00000312989 SLC43A3Q8NBI5 491 aa16.97■□□□□ 0.31
PPP1CA-201ENST00000312989 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
PPP1CA-201ENST00000312989 ELP1O95163 1332 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 RXRAP19793 462 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 TCEANC2Q96MN5 208 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
PPP1CA-201ENST00000312989 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 DYNC1LI2O43237 492 aaPredicted RBP16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 RGS20O76081 388 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 HSPA4P34932 840 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 MDM2Q00987 491 aaPredicted RBP16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 MCF2L2Q86YR7 1114 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 RAB11FIP4Q86YS3 637 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 PCSK9Q8NBP7 692 aaKnown RBP16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 COPS5Q92905 334 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 TOX2Q96NM4 488 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 WDR11Q9BZH6 1224 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 PXMP2Q9NR77 195 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 TBX21Q9UL17 535 aa16.95■□□□□ 0.3
PPP1CA-201ENST00000312989 BRPF3Q9ULD4 1205 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms