RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 YWHAEP62258 255 aaKnown RBP16.8■□□□□ 0.28
KDM3A-201ENST00000312912 RASA3Q14644 834 aa16.8■□□□□ 0.28
KDM3A-201ENST00000312912 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
KDM3A-201ENST00000312912 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 GMNNO75496 209 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 LIFRP42702 1097 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 PTPN12Q05209 780 aaKnown RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 STK38LQ9Y2H1 464 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 LARGE2Q8N3Y3 721 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 DDX25Q9UHL0 483 aaKnown RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 DAPK3O43293 454 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 GRK7Q8WTQ7 553 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 FAF1Q9UNN5 650 aaPredicted RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 HGSO14964 777 aaPredicted RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 MRPS9P82933 396 aaKnown RBP16.79■□□□□ 0.28
KDM3A-201ENST00000312912 DLGAP5Q15398 846 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 VPS37BQ9H9H4 285 aa16.79■□□□□ 0.28
KDM3A-201ENST00000312912 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 GUCY2CP25092 1073 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 EXOC3L4Q17RC7 722 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 FBXO11Q86XK2 927 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 ANKRD13CQ8N6S4 541 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 ACTR5Q9H9F9 607 aaPredicted RBP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 KLHL14Q9P2G3 628 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 GOLGA8HP0CJ92 632 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 COG7P83436 770 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 SASH1O94885 1247 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 MMP1P03956 469 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 TROVE2P10155 538 aaKnown RBP eCLIP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 PLEKHA4Q9H4M7 779 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 METP08581 1390 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 H0YCG3 227 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 POLE2P56282 527 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 GPATCH4Q5T3I0 446 aaKnown RBP16.78■□□□□ 0.28
KDM3A-201ENST00000312912 P2RX5Q93086 422 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 RNF14Q9UBS8 474 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 USH1CQ9Y6N9 552 aa16.78■□□□□ 0.28
KDM3A-201ENST00000312912 DNAJC8O75937 253 aaPredicted RBP16.77■□□□□ 0.28
KDM3A-201ENST00000312912 LARGE1O95461 756 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 RANBP1P43487 201 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 TPD52P55327 224 aaPredicted RBP16.77■□□□□ 0.28
KDM3A-201ENST00000312912 FKBP3Q00688 224 aaKnown RBP16.77■□□□□ 0.28
KDM3A-201ENST00000312912 AOC3Q16853 763 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 IFT88Q13099 833 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.28
KDM3A-201ENST00000312912 TYW1Q9NV66 732 aaKnown RBP16.77■□□□□ 0.28
KDM3A-201ENST00000312912 ADAM21Q9UKJ8 722 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 PRDM4Q9UKN5 801 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.28
KDM3A-201ENST00000312912 IFNB1P01574 187 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 HOXA7P31268 230 aaPredicted RBP16.77■□□□□ 0.27
KDM3A-201ENST00000312912 ATP1A2P50993 1020 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 EHHADHQ08426 723 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 VSTM4Q8IW00 320 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 AFAP1L2Q8N4X5 818 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.27
KDM3A-201ENST00000312912 PNMA2Q9UL42 364 aa16.77■□□□□ 0.27
KDM3A-201ENST00000312912 SH2B2O14492 632 aaPredicted RBP16.76■□□□□ 0.27
KDM3A-201ENST00000312912 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 ZNF658Q5TYW1 1059 aaPredicted RBP16.76■□□□□ 0.27
KDM3A-201ENST00000312912 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 ANKRD42Q8N9B4 389 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 ATP2A3Q93084 1043 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
KDM3A-201ENST00000312912 MAN1B1Q9UKM7 699 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 USP6P35125 1406 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 MAN2A1Q16706 1144 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
KDM3A-201ENST00000312912 RBL2Q08999 1139 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 KRT26Q7Z3Y9 468 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 RUNDC3BQ96NL0 473 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 M0R2C6 588 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 POLR2MP0CAP2 368 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 BTDP43251 543 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 GEN1Q17RS7 908 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 GNPTABQ3T906 1256 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 RNF34Q969K3 372 aa16.76■□□□□ 0.27
KDM3A-201ENST00000312912 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
KDM3A-201ENST00000312912 LRRC47Q8N1G4 583 aaKnown RBP16.75■□□□□ 0.27
KDM3A-201ENST00000312912 BBOF1Q8ND07 529 aa16.75■□□□□ 0.27
KDM3A-201ENST00000312912 CCT6BQ92526 530 aa16.75■□□□□ 0.27
KDM3A-201ENST00000312912 EEF2KMTQ96G04 330 aa16.75■□□□□ 0.27
KDM3A-201ENST00000312912 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms