RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
TRIM59-201ENST00000309784 KARSQ15046 597 aaKnown RBP12.59□□□□□ -0.39
TRIM59-201ENST00000309784 KRBA2Q6ZNG9 492 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 NAT10Q9H0A0 1025 aaKnown RBP12.59□□□□□ -0.39
TRIM59-201ENST00000309784 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 PSME4Q14997 1843 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 VGLL4Q14135 290 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
TRIM59-201ENST00000309784 DRC7Q8IY82 874 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 RRAGBQ5VZM2 374 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 SMARCE1Q969G3 411 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 EHMT1Q9H9B1 1298 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 PKD2L1Q9P0L9 805 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 CREBRFQ8IUR6 639 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
TRIM59-201ENST00000309784 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 GJA10Q969M2 543 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 LRWD1Q9UFC0 647 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 ARMC9Q7Z3E5 817 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.4
TRIM59-201ENST00000309784 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 FOXN1O15353 648 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 SMC2O95347 1197 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 LONP1P36776 959 aaKnown RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 ARL6IP4Q66PJ3 421 aaKnown RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 KANK3Q6NY19 840 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 POSTNQ15063 836 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 KLHL10Q6JEL2 608 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 BTNL9Q6UXG8 535 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 CABP7Q86V35 215 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
TRIM59-201ENST00000309784 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
TRIM59-201ENST00000309784 TPM4P67936 248 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 KRT79Q5XKE5 535 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
TRIM59-201ENST00000309784 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 SLC37A4O43826 429 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 CASP1P29466 404 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
TRIM59-201ENST00000309784 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 POTEMA6NI47 508 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 LAD1O00515 517 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
TRIM59-201ENST00000309784 MYCLP12524 364 aaPredicted RBP12.56□□□□□ -0.4
TRIM59-201ENST00000309784 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 SNX29Q8TEQ0 813 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 PCDHA5Q9Y5H7 936 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 SIPA1L1O43166 1804 aa12.56□□□□□ -0.4
TRIM59-201ENST00000309784 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 CHMP2AO43633 222 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 SNRNP48Q6IEG0 339 aaKnown RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 TRIM5Q9C035 493 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 TRAF5O00463 557 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 PPP1R9AQ9ULJ8 1098 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 ABCB11O95342 1321 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 M0R2N6 131 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 COG2Q14746 738 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 AOPEPQ8N6M6 819 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
TRIM59-201ENST00000309784 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
TRIM59-201ENST00000309784 MEIS2O14770 477 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
TRIM59-201ENST00000309784 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
TRIM59-201ENST00000309784 HPSEQ9Y251 543 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms