RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 CNTN2Q02246 1040 aa25.75■■□□□ 1.71
HOXD4-201ENST00000306324 PKN1Q16512 942 aa25.75■■□□□ 1.71
HOXD4-201ENST00000306324 ZNF792Q3KQV3 632 aa25.75■■□□□ 1.71
HOXD4-201ENST00000306324 RGS22Q8NE09 1264 aa25.75■■□□□ 1.71
HOXD4-201ENST00000306324 hCG_1984214I3L0E3 225 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 DEXIO95424 95 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 GRK4P32298 578 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 SLC9C1Q4G0N8 1177 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 ZNF713Q8N859 430 aaPredicted RBP25.74■■□□□ 1.71
HOXD4-201ENST00000306324 SLAIN1Q8ND83 568 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 TMX3Q96JJ7 454 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 BARHL2Q9NY43 387 aa25.74■■□□□ 1.71
HOXD4-201ENST00000306324 STXBP3O00186 592 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 FAM133AQ8N9E0 248 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 PXYLP1Q8TE99 480 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 SH3TC2Q8TF17 1288 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 TRIB2Q92519 343 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 MAML3Q96JK9 1138 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 PURBQ96QR8 312 aaKnown RBP25.73■■□□□ 1.71
HOXD4-201ENST00000306324 FLRT1Q9NZU1 646 aa25.73■■□□□ 1.71
HOXD4-201ENST00000306324 BIN2Q9UBW5 565 aaPredicted RBP25.73■■□□□ 1.71
HOXD4-201ENST00000306324 HOXA13P31271 388 aaPredicted RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 TYW1BQ6NUM6 668 aa25.72■■□□□ 1.71
HOXD4-201ENST00000306324 TRMT44Q8IYL2 757 aaKnown RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 NSUN7Q8NE18 718 aaKnown RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 ORC3Q9UBD5 711 aaPredicted RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 DIS3Q9Y2L1 958 aaKnown RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 STK36Q9NRP7 1315 aa25.72■■□□□ 1.71
HOXD4-201ENST00000306324 GCOM1H8Y6P7 765 aaPredicted RBP25.72■■□□□ 1.71
HOXD4-201ENST00000306324 POLR2MP0CAP2 368 aa25.72■■□□□ 1.71
HOXD4-201ENST00000306324 PSTPIP2Q9H939 334 aa25.72■■□□□ 1.71
HOXD4-201ENST00000306324 JAK2O60674 1132 aa25.71■■□□□ 1.71
HOXD4-201ENST00000306324 HSD17B4P51659 736 aa25.71■■□□□ 1.71
HOXD4-201ENST00000306324 PPP1R18Q6NYC8 613 aa25.71■■□□□ 1.71
HOXD4-201ENST00000306324 SYTL5Q8TDW5 730 aaPredicted RBP25.71■■□□□ 1.71
HOXD4-201ENST00000306324 MAF1Q9H063 256 aa25.71■■□□□ 1.71
HOXD4-201ENST00000306324 SOWAHBA6NEL2 793 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 HMGCRP04035 888 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 CCDC12Q8WUD4 166 aaPredicted RBP25.7■■□□□ 1.7
HOXD4-201ENST00000306324 CUL5Q93034 780 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 FGD4Q96M96 766 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 AIFM3Q96NN9 605 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 MAP3K20Q9NYL2 800 aaKnown RBP25.7■■□□□ 1.7
HOXD4-201ENST00000306324 VPS54Q9P1Q0 977 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 COL20A1Q9P218 1284 aa25.7■■□□□ 1.7
HOXD4-201ENST00000306324 ADD3Q9UEY8 706 aaKnown RBP25.7■■□□□ 1.7
HOXD4-201ENST00000306324 SMCO2A6NFE2 343 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 GHRHRQ02643 423 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 OLFML2BQ68BL8 750 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 USP17L6PQ6QN14 398 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 FCHSD1Q86WN1 690 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 SAMD3Q8N6K7 520 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 SMARCC2Q8TAQ2 1214 aa25.69■■□□□ 1.7
HOXD4-201ENST00000306324 LLPHQ9BRT6 129 aaKnown RBP25.69■■□□□ 1.7
HOXD4-201ENST00000306324 INHAP05111 366 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 FDPSP14324 419 aaKnown RBP25.68■■□□□ 1.7
HOXD4-201ENST00000306324 CYP2C19P33261 490 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 ADCY7P51828 1080 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 TRIM32Q13049 653 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 MFSD14CQ5VZR4 134 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 ZNF467Q7Z7K2 595 aaPredicted RBP25.68■■□□□ 1.7
HOXD4-201ENST00000306324 TAAR1Q96RJ0 339 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 TINF2Q9BSI4 451 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 ASTN1O14525 1302 aa25.68■■□□□ 1.7
HOXD4-201ENST00000306324 ALDH5A1P51649 535 aaPredicted RBP25.67■■□□□ 1.7
HOXD4-201ENST00000306324 CCDC148Q8NFR7 591 aa25.67■■□□□ 1.7
HOXD4-201ENST00000306324 WASF1Q92558 559 aa25.67■■□□□ 1.7
HOXD4-201ENST00000306324 MEIS2O14770 477 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 MYCP01106 439 aaPredicted RBP25.66■■□□□ 1.7
HOXD4-201ENST00000306324 MRPL12P52815 198 aaKnown RBP25.66■■□□□ 1.7
HOXD4-201ENST00000306324 UBE2SQ16763 222 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 DNERQ8NFT8 737 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 RMDN3Q96TC7 470 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 RIC8AQ9NPQ8 531 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 SH3GLB2Q9NR46 395 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 ASB14A6NK59 587 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 PIK3CDO00329 1044 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 UBXN2AP68543 259 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 SHISA4Q96DD7 197 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 ALG1Q9BT22 464 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 C6orf50Q9HD87 102 aa25.66■■□□□ 1.7
HOXD4-201ENST00000306324 DDX49Q9Y6V7 483 aaKnown RBP25.66■■□□□ 1.7
HOXD4-201ENST00000306324 PRKAR2AP13861 404 aaKnown RBP25.65■■□□□ 1.7
HOXD4-201ENST00000306324 NLRP5P59047 1200 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 ARHGEF16Q5VV41 709 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 MAMDC4Q6UXC1 1216 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 ARMCX2Q7L311 632 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 MSL3Q8N5Y2 521 aaKnown RBP25.65■■□□□ 1.7
HOXD4-201ENST00000306324 NSUN6Q8TEA1 469 aaKnown RBP25.65■■□□□ 1.7
HOXD4-201ENST00000306324 ZMYND12Q9H0C1 365 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 GLT8D2Q9H1C3 349 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 LRRC37A2A6NM11 1700 aa25.65■■□□□ 1.7
HOXD4-201ENST00000306324 BRCA2P51587 3418 aa25.64■■□□□ 1.7
HOXD4-201ENST00000306324 ESYT2A0FGR8 921 aa25.64■■□□□ 1.69
HOXD4-201ENST00000306324 XBP1P17861 261 aa25.64■■□□□ 1.69
HOXD4-201ENST00000306324 EIF2AK2P19525 551 aaKnown RBP25.64■■□□□ 1.69
HOXD4-201ENST00000306324 HMGN5P82970 282 aaKnown RBP25.64■■□□□ 1.69
HOXD4-201ENST00000306324 CACNB2Q08289 660 aaPredicted RBP25.64■■□□□ 1.69
HOXD4-201ENST00000306324 TNS4Q8IZW8 715 aa25.64■■□□□ 1.69
HOXD4-201ENST00000306324 SNX21Q969T3 373 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms