RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 MTUS1Q9ULD2 1270 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 RIPOR2Q9Y4F9 1068 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 UBE2Q2LH0YL09 131 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 KRIT1O00522 736 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 ACTN4O43707 911 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 HEXIM1O94992 359 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 ALX1Q15699 326 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 U2AF1L4Q8WU68 220 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 PANK4Q9NVE7 773 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 PKD2L1Q9P0L9 805 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 SLC1A4P43007 532 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 CUEDC2Q9H467 287 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 EPHB4P54760 987 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 SEL1L2Q5TEA6 688 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 RAD9BQ6WBX8 426 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 CCDC50Q8IVM0 306 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 DPH5Q9H2P9 285 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 ARMCX3Q9UH62 379 aaPredicted RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 A0A1B0GTH6 734 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 LGALS16A8MUM7 142 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 ADAM9Q13443 819 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 MAN2A1Q16706 1144 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 ARL6IP4Q66PJ3 421 aaKnown RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 ADAT2Q7Z6V5 191 aaKnown RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 TBCKQ8TEA7 893 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 CTTNBP2NLQ9P2B4 639 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 FTCDO95954 541 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
DDX54-201ENST00000306014 KIF11P52732 1056 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 FNBP4Q8N3X1 1017 aaPredicted RBP14.65□□□□□ -0.06
DDX54-201ENST00000306014 MAGEF1Q9HAY2 307 aa14.65□□□□□ -0.06
DDX54-201ENST00000306014 LAD1O00515 517 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 USH1GQ495M9 461 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 MAEAQ7L5Y9 396 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 REXO1L1PQ8IX06 675 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 AK8Q96MA6 479 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 GGA1Q9UJY5 639 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 GNA14O95837 355 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 ARHGAP44Q17R89 818 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 USP17L1Q7RTZ2 530 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 PNMA8AQ86V59 439 aaPredicted RBP14.64□□□□□ -0.07
DDX54-201ENST00000306014 RDH13Q8NBN7 331 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 PCDHA13Q9Y5I0 950 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 SLIT1O75093 1534 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 PP2D1A8MPX8 630 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 CYP2D6P10635 497 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 NR1I3Q14994 352 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 MFSD14BQ5SR56 506 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 NAA35Q5VZE5 725 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 CHP1Q99653 195 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 NDST4Q9H3R1 872 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.64□□□□□ -0.07
DDX54-201ENST00000306014 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
DDX54-201ENST00000306014 MYCT1Q8N699 235 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
DDX54-201ENST00000306014 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 SWAP70Q9UH65 585 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 ZNF804BA4D1E1 1349 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 PPFIA4O75335 1185 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 MYL1P05976 194 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 MTMR3Q13615 1198 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 SYCE1Q8N0S2 351 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 DDX25Q9UHL0 483 aaKnown RBP14.63□□□□□ -0.07
DDX54-201ENST00000306014 PRDM4Q9UKN5 801 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
DDX54-201ENST00000306014 STAT1P42224 750 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 MECOMQ03112 1051 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 LRRN4CLQ8ND94 238 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 CPVLQ9H3G5 476 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 PSTPIP2Q9H939 334 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 ADD3Q9UEY8 706 aaKnown RBP14.63□□□□□ -0.07
DDX54-201ENST00000306014 AMFRQ9UKV5 643 aa14.63□□□□□ -0.07
DDX54-201ENST00000306014 RXRBP28702 533 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 GGCXP38435 758 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 PLA2G4AP47712 749 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
DDX54-201ENST00000306014 TRAF1Q13077 416 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 ERFEQ4G0M1 354 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 KIAA1024Q9UPX6 916 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 FKBP3Q00688 224 aaKnown RBP14.62□□□□□ -0.07
DDX54-201ENST00000306014 NCAPHQ15003 741 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 EXOC3O60645 756 aa14.62□□□□□ -0.07
DDX54-201ENST00000306014 ATP1A1P05023 1023 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms