RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
HMGN1P35-201ENST00000303758 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
HMGN1P35-201ENST00000303758 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
HMGN1P35-201ENST00000303758 MROH7Q68CQ1 1323 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 E7EWF7 191 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 ZEB2O60315 1214 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 RPS6P62753 249 aaKnown RBP12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 PDE4DQ08499 809 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 WTAPQ15007 396 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 FBXO11Q86XK2 927 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
HMGN1P35-201ENST00000303758 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 RAG1P15918 1043 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 BEX3Q00994 111 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 SEC23AQ15436 765 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 FSCN1Q16658 493 aaKnown RBP12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 QRICH1Q2TAL8 776 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 DNERQ8NFT8 737 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 BADQ92934 168 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
HMGN1P35-201ENST00000303758 ELP1O95163 1332 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 LAMA2P24043 3122 aaKnown RBP12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 SMPD1P17405 629 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 CASC1Q6TDU7 716 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 CHST3Q7LGC8 479 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 SH3RF1Q7Z6J0 888 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 MORC4Q8TE76 937 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 ANO2Q9NQ90 1003 aa12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 GNEQ9Y223 722 aaKnown RBP12.65□□□□□ -0.38
HMGN1P35-201ENST00000303758 KIAA1217Q5T5P2 1943 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 CABYRO75952 493 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 GRM4Q14833 912 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 STOX1Q6ZVD7 989 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 OR6J1Q8NGC5 347 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 ESYT1Q9BSJ8 1104 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 WDR11Q9BZH6 1224 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 MAF1Q9H063 256 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 Q9Y3F1 56 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
HMGN1P35-201ENST00000303758 ARVCFO00192 962 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 ZBTB5O15062 677 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 CFBP00751 764 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 CPT1AP50416 773 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 TRAF1Q13077 416 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
HMGN1P35-201ENST00000303758 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 CTAGE5O15320 804 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 PRC1O43663 620 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 PTGS1P23219 599 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 EDNRBP24530 442 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 NKX3-2P78367 333 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 FPGSQ05932 587 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 ARHGEF16Q5VV41 709 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 SYTL5Q8TDW5 730 aaPredicted RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
HMGN1P35-201ENST00000303758 RMDN3Q96TC7 470 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms