RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 BLIDQ8IZY5 108 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 SYTL5Q8TDW5 730 aaPredicted RBP10.9□□□□□ -0.66
RFX3-201ENST00000302303 USP6NLQ92738 828 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 MROH8Q9H579 483 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 SAGE1Q9NXZ1 904 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 PNMA2Q9UL42 364 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 LCTP09848 1927 aa10.9□□□□□ -0.66
RFX3-201ENST00000302303 WNT7AO00755 349 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 COBLO75128 1261 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 CFBP00751 764 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 IGHA2P01877 340 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 TRAF1Q13077 416 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 RESTQ13127 1097 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 MORN1Q5T089 497 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 GALNT17Q6IS24 598 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 GPR142Q7Z601 462 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 FAM133AQ8N9E0 248 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 MAF1Q9H063 256 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 PLXNB2O15031 1838 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 GPR25O00155 361 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 PDCP20941 246 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 PTPREP23469 700 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 ADCY7P51828 1080 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 CNTN2Q02246 1040 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 GRB14Q14449 540 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 SAMD3Q8N6K7 520 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 CCDC148Q8NFR7 591 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 CCDC12Q8WUD4 166 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 CUL5Q93034 780 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 TAAR1Q96RJ0 339 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 FOXP1Q9H334 677 aaPredicted RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 C6orf50Q9HD87 102 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 MAP3K20Q9NYL2 800 aaKnown RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 KIF3AQ9Y496 699 aa10.89□□□□□ -0.67
RFX3-201ENST00000302303 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
RFX3-201ENST00000302303 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
RFX3-201ENST00000302303 PGK2P07205 417 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
RFX3-201ENST00000302303 XBP1P17861 261 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 CALML3P27482 149 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 GNA11P29992 359 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 MAPK4P31152 587 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 COPB2P35606 906 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 KRT2P35908 639 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 MRPL12P52815 198 aaKnown RBP10.88□□□□□ -0.67
RFX3-201ENST00000302303 CCNA1P78396 465 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 SP3Q02447 781 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 ZNF792Q3KQV3 632 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 JAKMIP3Q5VZ66 844 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 FAM173BQ6P4H8 233 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 RNF207Q6ZRF8 634 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 ABRAQ8N0Z2 381 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 CHAMP1Q96JM3 812 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 FBXO40Q9UH90 709 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 RPTORQ8N122 1335 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
RFX3-201ENST00000302303 CENPFP49454 3210 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 VPS37CA5D8V6 355 aaPredicted RBP10.87□□□□□ -0.67
RFX3-201ENST00000302303 STRNO43815 780 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 ECM2O94769 699 aaPredicted RBP10.87□□□□□ -0.67
RFX3-201ENST00000302303 ADORA2AP29274 412 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 NOSTRINQ8IVI9 506 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
RFX3-201ENST00000302303 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
RFX3-201ENST00000302303 ZNF296Q8WUU4 475 aaPredicted RBP10.87□□□□□ -0.67
RFX3-201ENST00000302303 ZNFX1Q9P2E3 1918 aaKnown RBP10.86□□□□□ -0.67
RFX3-201ENST00000302303 H3BQV1 296 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 F13A1P00488 732 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 FCER1AP12319 257 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 EDNRBP24530 442 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 PSMC4P43686 418 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 TRIM29Q14134 588 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 IFFO2Q5TF58 517 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
RFX3-201ENST00000302303 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 ANKRD35Q8N283 1001 aa10.86□□□□□ -0.67
RFX3-201ENST00000302303 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
RFX3-201ENST00000302303 MMP19Q99542 508 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms