RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CNNM1Q9NRU3 951 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.47
ZNF558-201ENST00000301475 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 E7EVH7 732 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 TRADDQ15628 312 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 CSGALNACT2Q8N6G5 542 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 MIEF2Q96C03 454 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 NUP58Q9BVL2 599 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 PSMA7O14818 248 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 USO1O60763 962 aaKnown RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 RASGRF1Q13972 1273 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 IQCA1Q86XH1 822 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 C2CD5Q86YS7 1000 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
ZNF558-201ENST00000301475 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 MTMR8Q96EF0 704 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 CYFIP2Q96F07 1278 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 DISC1Q9NRI5 854 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 ODF2LQ9ULJ1 636 aa12.08□□□□□ -0.48
ZNF558-201ENST00000301475 SNAP23O00161 211 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 PDE8BO95263 885 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 CD302Q8IX05 232 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 MREGQ8N565 214 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 MIGA1Q8NAN2 632 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 OSBPL7Q9BZF2 842 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 HPDP32754 393 aaPredicted RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 SPATA5Q8NB90 893 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 GIMAP8Q8ND71 665 aaPredicted RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 HELBQ8NG08 1087 aaPredicted RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
ZNF558-201ENST00000301475 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 DDX20Q9UHI6 824 aaKnown RBP12.07□□□□□ -0.48
ZNF558-201ENST00000301475 DNM1LO00429 736 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 ZPR1O75312 459 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
ZNF558-201ENST00000301475 NF2P35240 595 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 PAK2Q13177 524 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 KCNB1Q14721 858 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 CYB5D1Q6P9G0 228 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 IFT20Q8IY31 132 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 CASKIN2Q8WXE0 1202 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 PLIN2Q99541 437 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 A0A1W2PQJ5 194 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 RHOBTB3O94955 611 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
ZNF558-201ENST00000301475 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 QPCTQ16769 361 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 FIGNQ5HY92 759 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 CEP57Q86XR8 500 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 FUKQ8N0W3 1084 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 C4orf32Q8N8J7 132 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
ZNF558-201ENST00000301475 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 GGA2Q9UJY4 613 aa12.06□□□□□ -0.48
ZNF558-201ENST00000301475 BUB1O43683 1085 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 LCA5LO95447 670 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 MTIF2P46199 727 aaKnown RBP12.05□□□□□ -0.48
ZNF558-201ENST00000301475 DNA2P51530 1060 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
ZNF558-201ENST00000301475 ANKRD40Q6AI12 368 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
ZNF558-201ENST00000301475 FAXDC2Q96IV6 333 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 NOC4LQ9BVI4 516 aaKnown RBP12.05□□□□□ -0.48
ZNF558-201ENST00000301475 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 HAUS2Q9NVX0 235 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 KAT6BQ8WYB5 2073 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 OPLAHO14841 1288 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 BACH1O14867 736 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 ADAMTS2O95450 1211 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 TROAPQ12815 778 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 SNCBQ16143 134 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 SDR42E1Q8WUS8 393 aa12.05□□□□□ -0.48
ZNF558-201ENST00000301475 FAM207AQ9NSI2 230 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms