RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 NFU1Q9UMS0 254 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 ADGRL3Q9HAR2 1447 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 HEXIM1O94992 359 aaKnown RBP14.71□□□□□ -0.05
CASC4-201ENST00000299957 ABL1P00519 1130 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 MICALCLQ6ZW33 695 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 IFT20Q8IY31 132 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 GOLPH3Q9H4A6 298 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 ADD3Q9UEY8 706 aaKnown RBP14.71□□□□□ -0.05
CASC4-201ENST00000299957 GFPT1Q06210 699 aaPredicted RBP14.71□□□□□ -0.06
CASC4-201ENST00000299957 ADAM9Q13443 819 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 FAM26FQ5R3K3 315 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 CCDC155Q8N6L0 562 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 ERMNQ8TAM6 284 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 TMEM60Q9H2L4 133 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.71□□□□□ -0.06
CASC4-201ENST00000299957 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.06
CASC4-201ENST00000299957 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 ZNF335Q9H4Z2 1342 aaPredicted RBP14.7□□□□□ -0.06
CASC4-201ENST00000299957 NR1I3Q14994 352 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
CASC4-201ENST00000299957 DNAAF5Q86Y56 855 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 WDR66Q8TBY9 1149 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 RIMS1Q86UR5 1692 aaKnown RBP14.7□□□□□ -0.06
CASC4-201ENST00000299957 ACTN4O43707 911 aaKnown RBP14.7□□□□□ -0.06
CASC4-201ENST00000299957 SASH3O75995 380 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 PLEKP08567 350 aaPredicted RBP14.7□□□□□ -0.06
CASC4-201ENST00000299957 KIF11P52732 1056 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 HS2ST1Q7LGA3 356 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 SH2D3CQ8N5H7 860 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 TSGA10Q9BZW7 698 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 NYXQ9GZU5 481 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 TMOD2Q9NZR1 351 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 TUBBP07437 444 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 CASP7P55210 303 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 MYCT1Q8N699 235 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 PANK4Q9NVE7 773 aa14.7□□□□□ -0.06
CASC4-201ENST00000299957 DDAH1O94760 285 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
CASC4-201ENST00000299957 IFNAR2P48551 515 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 STK4Q13043 487 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 ADGRA1Q86SQ6 560 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 LARP4BQ92615 738 aaKnown RBP14.69□□□□□ -0.06
CASC4-201ENST00000299957 MS4A14Q96JA4 679 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 L2HGDHQ9H9P8 463 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 A0A087X0B3 334 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 LRRN2O75325 713 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 TRIM65Q6PJ69 517 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 PHLDB2Q86SQ0 1253 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.69□□□□□ -0.06
CASC4-201ENST00000299957 MAP3K14Q99558 947 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 NDST4Q9H3R1 872 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 GGA1Q9UJY5 639 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 A0A1B0GTH6 734 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
CASC4-201ENST00000299957 CTNNA1P35221 906 aaKnown RBP14.69□□□□□ -0.06
CASC4-201ENST00000299957 IFT88Q13099 833 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 TAB3Q8N5C8 712 aaPredicted RBP14.69□□□□□ -0.06
CASC4-201ENST00000299957 EXOC4Q96A65 974 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 CABS1Q96KC9 395 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 PSTPIP2Q9H939 334 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 CPDO75976 1380 aa14.69□□□□□ -0.06
CASC4-201ENST00000299957 H3BQF6 201 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CYP2C19P33261 490 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 NTRK3Q16288 839 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CCDC174Q6PII3 467 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 LRRC27Q9C0I9 530 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 KRIT1O00522 736 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 PLCB3Q01970 1234 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 PPFIA1Q13136 1202 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CAPN12Q6ZSI9 719 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 BICD1Q96G01 975 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
CASC4-201ENST00000299957 USP40Q9NVE5 1235 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
CASC4-201ENST00000299957 H2AFXP16104 143 aaPredicted RBP14.68□□□□□ -0.06
CASC4-201ENST00000299957 CCNE1P24864 410 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CETN1Q12798 172 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 ANKRD40Q6AI12 368 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CCDC50Q8IVM0 306 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 TMEM47Q9BQJ4 181 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 CTTNBP2NLQ9P2B4 639 aa14.68□□□□□ -0.06
CASC4-201ENST00000299957 DDX25Q9UHL0 483 aaKnown RBP14.68□□□□□ -0.06
CASC4-201ENST00000299957 LRRC53A6NM62 1247 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L15C9J2P7 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L13C9JLJ4 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L11C9JVI0 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L18D6R9N7 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L22D6RA61 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L17D6RBQ6 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L19D6RCP7 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L20D6RJB6 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 TDP2O95551 362 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms