RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 PCDHA12Q9UN75 941 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 NPHP3-ACAD11A0A0J9YXS1 232 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 TPM4P67936 248 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 DPF2Q92785 391 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 NFIBO00712 420 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 CLSTN1O94985 981 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 BMP6P22004 513 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
TTC17-202ENST00000299240 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
TTC17-202ENST00000299240 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 NELFCDQ8IXH7 590 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 VPS16Q9H269 839 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 RIOX1Q9H6W3 641 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 ELP3Q9H9T3 547 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
TTC17-202ENST00000299240 LMNB1P20700 586 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 ATP2C1P98194 919 aaPredicted RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 ENOX2Q16206 610 aaKnown RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 PIGOQ8TEQ8 1089 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 KIAA1024Q9UPX6 916 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 COL24A1Q17RW2 1714 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 CNTNAP1P78357 1384 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 E9PMD0 336 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 ZBTB39O15060 712 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 UBASH3AP57075 661 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.13
TTC17-202ENST00000299240 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 ATG4CQ96DT6 458 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 P2RX7Q99572 595 aaKnown RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 RPAP3Q9H6T3 665 aaPredicted RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.136e-9■■■■■ 94.9
TTC17-202ENST00000299240 RGL1Q9NZL6 768 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 NYAP2Q9P242 653 aa14.21□□□□□ -0.13
TTC17-202ENST00000299240 R3HCC1Q9Y3T6 440 aaKnown RBP14.21□□□□□ -0.13
TTC17-202ENST00000299240 TESPA1A2RU30 521 aaPredicted RBP14.21□□□□□ -0.14
TTC17-202ENST00000299240 NLRP12P59046 1061 aa14.21□□□□□ -0.14
TTC17-202ENST00000299240 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.14
TTC17-202ENST00000299240 TNFRSF25Q93038 417 aa14.21□□□□□ -0.14
TTC17-202ENST00000299240 HERC5Q9UII4 1024 aaKnown RBP14.21□□□□□ -0.14
TTC17-202ENST00000299240 ABCB11O95342 1321 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTECB2RU33 542 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 CCDC144BQ3MJ40 725 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 LDHDQ86WU2 507 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 TPH2Q8IWU9 490 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 DHX40Q8IX18 779 aaKnown RBP14.2□□□□□ -0.14
TTC17-202ENST00000299240 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 COL11A2P13942 1736 aaPredicted RBP14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 FCER1AP12319 257 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 CCDC39Q9UFE4 941 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 RCAN1P53805 252 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 PDE4DQ08499 809 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 KRT79Q5XKE5 535 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 FERMT2Q96AC1 680 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 BCAS3Q9H6U6 928 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 PYCARDQ9ULZ3 195 aa14.2□□□□□ -0.14
TTC17-202ENST00000299240 ZNF75DP51815 510 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 CTTNQ14247 550 aaKnown RBP14.19□□□□□ -0.14
TTC17-202ENST00000299240 FAM43AQ8N2R8 423 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ANKS1AQ92625 1134 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 TRAF5O00463 557 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ZBTB9Q96C00 473 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ROBO3Q96MS0 1386 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
TTC17-202ENST00000299240 CD44P16070 742 aaKnown RBP14.19□□□□□ -0.14
TTC17-202ENST00000299240 C16orf45Q96MC5 204 aaPredicted RBP14.19□□□□□ -0.14
TTC17-202ENST00000299240 EHD4Q9H223 541 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
TTC17-202ENST00000299240 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 FANCCQ00597 558 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 IQCB1Q15051 598 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 KCNK18Q7Z418 384 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 HPSEQ9Y251 543 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
TTC17-202ENST00000299240 GLIS3Q8NEA6 775 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 CHURC1Q8WUH1 139 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 TAB2Q9NYJ8 693 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
TTC17-202ENST00000299240 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 MTRQ99707 1265 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 TMEM150BA6NC51 233 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 MYL5Q02045 173 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 DISC1Q9NRI5 854 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
TTC17-202ENST00000299240 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms