RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PKN1Q16512 942 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 SPATS2Q86XZ4 545 aaKnown RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 RETREG2Q8NC44 543 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 EPN3Q9H201 632 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 ZHX3Q9H4I2 956 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 SMIM23A6NLE4 172 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 FAM153BP0C7A2 387 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 ATF3P18847 181 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CALML3P27482 149 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 FAM153CQ494X1 144 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 ANKRD40Q6AI12 368 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 FAM153AQ9UHL3 310 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 PLAAQ9Y263 795 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
TRUB1-201ENST00000298746 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 USP17L21D6R901 530 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 FCER1AP12319 257 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 FECHP22830 423 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
TRUB1-201ENST00000298746 HAUS3Q68CZ6 603 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 BLIDQ8IZY5 108 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 OR2W6PQ8NHA6 318 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 TRIM31Q9BZY9 425 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 NEBLO76041 1014 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 GLI1P08151 1106 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
TRUB1-201ENST00000298746 ABCC12Q96J65 1359 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 LRRC53A6NM62 1247 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 CEP104O60308 925 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 CCNE1P24864 410 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
TRUB1-201ENST00000298746 TNNC1P63316 161 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 RAPGEF1Q13905 1077 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 SNCBQ16143 134 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 CABP7Q86V35 215 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
TRUB1-201ENST00000298746 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 TCRBV5S4A2TA0A5A2 114 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 KIF5BP33176 963 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 AMPD3Q01432 767 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 STK4Q13043 487 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 TAX1BP1Q86VP1 789 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 KCNK3O14649 394 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 SLC1A4P43007 532 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 MYCBPAPQ8TBZ2 947 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
TRUB1-201ENST00000298746 SH3GL2Q99962 352 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
TRUB1-201ENST00000298746 PDE8AO60658 829 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PLCG1P19174 1290 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 TMOD1P28289 359 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PRPF4BQ13523 1007 aaKnown RBP12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PTGISQ16647 500 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 NLRP10Q86W26 655 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 CACNA2D3Q8IZS8 1091 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 KIRREL3Q8IZU9 778 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 ATP6V1G3Q96LB4 118 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 NDST4Q9H3R1 872 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PALMO75781 387 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 SCP2P22307 547 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
TRUB1-201ENST00000298746 ARHGAP20Q9P2F6 1191 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 JAG2Q9Y219 1238 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 ZNF263O14978 683 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 CCNT1O60563 726 aaKnown RBP12.6□□□□□ -0.39
TRUB1-201ENST00000298746 CSF1RP07333 972 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 TECP42680 631 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 IL17AQ16552 155 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 SLC9C1Q4G0N8 1177 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 SLC24A3Q9HC58 644 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 SLC40A1Q9NP59 571 aa12.6□□□□□ -0.39
TRUB1-201ENST00000298746 FGFR1OPO95684 399 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms