RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 PIGSQ96S52 555 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 GPCPD1Q9NPB8 672 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 ZC3H4Q9UPT8 1303 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 STXBP3O00186 592 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 USP2O75604 605 aaPredicted RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 ASPRV1Q53RT3 343 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 AXDND1Q5T1B0 1012 aaPredicted RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 MNS1Q8NEH6 495 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 WASF1Q92558 559 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 SECISBP2LQ93073 1101 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 NAT10Q9H0A0 1025 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 VAT1LQ9HCJ6 419 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 CFAP45Q9UL16 551 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 CLIC4Q9Y696 253 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 USP17L10C9JJH3 530 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 CPP00450 1065 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 EPHX2P34913 555 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 GNAQP50148 359 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 MYSM1Q5VVJ2 828 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 SLFN13Q68D06 897 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 ARMCX5Q6P1M9 558 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 SUGP1Q8IWZ8 645 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 DIS3L2Q8IYB7 885 aaKnown RBP7.51□□□□□ -1.21
TMC1-201ENST00000297784 CEP57L1Q8IYX8 460 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 LZTS2Q9BRK4 669 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 CABP5Q9NP86 173 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 BARHL2Q9NY43 387 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 ADAM21Q9UKJ8 722 aa7.51□□□□□ -1.21
TMC1-201ENST00000297784 MAP2K7O14733 419 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 ASNSP08243 561 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 LMOD1P29536 600 aaPredicted RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 CEBPZQ03701 1054 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 TTC31Q49AM3 519 aaPredicted RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 USP50Q70EL3 339 aaPredicted RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 RSRC2Q7L4I2 434 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 NOSTRINQ8IVI9 506 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 FUT8Q9BYC5 575 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 FOXP1Q9H334 677 aaPredicted RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 TAF1DQ9H5J8 278 aaPredicted RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 SYNPO2Q9UMS6 1093 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 JRKLQ9Y4A0 524 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 SEC31AO94979 1220 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 SFPQP23246 707 aaKnown RBP eCLIP7.5□□□□□ -1.21
TMC1-201ENST00000297784 SLC1A4P43007 532 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 C1QBPQ07021 282 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 GPATCH4Q5T3I0 446 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
TMC1-201ENST00000297784 ATL3Q6DD88 541 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 BRAPQ7Z569 592 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 HOMER1Q86YM7 354 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 DCAF4Q8WV16 495 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 ARFGAP3Q9NP61 516 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 SH3GLB2Q9NR46 395 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 RCOR1Q9UKL0 485 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 PPP2R3BQ9Y5P8 575 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 ENGASEQ8NFI3 743 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.5□□□□□ -1.21
TMC1-201ENST00000297784 RABGGTAQ92696 567 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 ZMYND12Q9H0C1 365 aa7.5□□□□□ -1.21
TMC1-201ENST00000297784 COL11A1P12107 1806 aaPredicted RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 CLGNO14967 610 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 EDIL3O43854 480 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 PTPRAP18433 802 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 GYS2P54840 703 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 SNAP25P60880 206 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 AKAP17AQ02040 695 aaKnown RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 BRD3Q15059 726 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 PTPAQ15257 358 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 BTNL9Q6UXG8 535 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 LINC00301Q8NCQ3 95 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 HNRNPLLQ8WVV9 542 aaKnown RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 COA7Q96BR5 231 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 WRNIP1Q96S55 665 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 TMX1Q9H3N1 280 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 ZCCHC17Q9NP64 241 aaKnown RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 CCDC151A5D8V7 595 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 RAD21O60216 631 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 TAL1P17542 331 aaPredicted RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
TMC1-201ENST00000297784 TRIM29Q14134 588 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 ZYXQ15942 572 aaKnown RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 HEATR3Q7Z4Q2 680 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 ZC3H15Q8WU90 426 aaKnown RBP7.49□□□□□ -1.21
TMC1-201ENST00000297784 PPM1EQ8WY54 764 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 CARD6Q9BX69 1037 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 VCPKMTQ9H867 229 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 PCDHA6Q9UN73 950 aa7.49□□□□□ -1.21
TMC1-201ENST00000297784 PCDHA8Q9Y5H6 950 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms