RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CRACR2AQ9BSW2 395 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 A0A0U1RQJ8 604 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 B4DLN1 442 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 ECE2O60344 883 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 SARSP49591 514 aaKnown RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 PPP4CP60510 307 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 PDE4CQ08493 712 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 SF3B2Q13435 895 aaKnown RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 ATRIPQ8WXE1 791 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 MASTLQ96GX5 879 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 ZNF277Q9NRM2 450 aaPredicted RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 HOMER2Q9NSB8 354 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 FAM207AQ9NSI2 230 aaPredicted RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 RMND1Q9NWS8 449 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 LONP1P36776 959 aaKnown RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 PRKG1Q13976 671 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 DEFB132Q7Z7B7 95 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 KIAA1328Q86T90 577 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 LRRN4CLQ8ND94 238 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 INTS13Q9NVM9 706 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 PCDHA12Q9UN75 941 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 PALM3A6NDB9 673 aaPredicted RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 STAT3P40763 770 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 EPS15P42566 896 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 TBC1D10BQ4KMP7 808 aaPredicted RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 NCAPH2Q6IBW4 605 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 MED15Q96RN5 788 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 PSMB7Q99436 277 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 COL11A2P13942 1736 aaPredicted RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 ETF1P62495 437 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 CRAMP1Q96RY5 1269 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 MTRQ99707 1265 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 NOC4LQ9BVI4 516 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 RAB34Q9BZG1 259 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 ARHGAP6O43182 974 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 SLC37A4O43826 429 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 KIF5CO60282 957 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 CCDC175P0C221 793 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 RXRBP28702 533 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 PMS1P54277 932 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 STK4Q13043 487 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 ZNHIT6Q9NWK9 470 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 DDX25Q9UHL0 483 aaKnown RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
PRDM9-201ENST00000296682 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
PRDM9-201ENST00000296682 MYH8P13535 1937 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 TRAF5O00463 557 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 IL1R1P14778 569 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 TRAPPC10P48553 1259 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 AMPD3Q01432 767 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 ABCB5Q2M3G0 1257 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 CCDC40Q4G0X9 1142 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 TRIML1Q8N9V2 468 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 CAPZA3Q96KX2 299 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 NCBP1Q09161 790 aaKnown RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 HERC4Q5GLZ8 1057 aaPredicted RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 ANKRD13CQ8N6S4 541 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 CUL5Q93034 780 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 PRMT6Q96LA8 375 aaPredicted RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 WDR24Q96S15 920 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 MAP7D2Q96T17 732 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 NLRC4Q9NPP4 1024 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 LUC7L2Q9Y383 392 aaKnown RBP10.41□□□□□ -0.74
PRDM9-201ENST00000296682 KIF13BQ9NQT8 1826 aa10.41□□□□□ -0.74
PRDM9-201ENST00000296682 ENC1O14682 589 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 CCP110O43303 1012 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 TFRCP02786 760 aaKnown RBP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 MATR3P43243 847 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 FKBP15Q5T1M5 1219 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 LZTS2Q9BRK4 669 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 JMJD4Q9H9V9 463 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 NPHP3-ACAD11A0A0J9YXS1 232 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 MACROD2A1Z1Q3 448 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 SFI1A8K8P3 1242 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 E9PMD0 336 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 POLR3GO15318 223 aaPredicted RBP10.4□□□□□ -0.74
PRDM9-201ENST00000296682 SORBS3O60504 671 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 KLK7P49862 253 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 PTPROQ16827 1216 aa10.4□□□□□ -0.74
PRDM9-201ENST00000296682 TDRD12Q587J7 1177 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms