RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TLK2Q86UE8 772 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 ADGRF4Q8IZF3 695 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 VTA1Q9NP79 307 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
SNF8-201ENST00000290330 SZT2Q5T011 3432 aa12.24□□□□□ -0.45
SNF8-201ENST00000290330 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 DYNC1LI2O43237 492 aaPredicted RBP12.23□□□□□ -0.45
SNF8-201ENST00000290330 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
SNF8-201ENST00000290330 PTGS1P23219 599 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 CDK7P50613 346 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 BEX3Q00994 111 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 TRDNQ13061 729 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 USH1GQ495M9 461 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 TMEM63BQ5T3F8 832 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
SNF8-201ENST00000290330 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 Q9Y3F1 56 aa12.23□□□□□ -0.45
SNF8-201ENST00000290330 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
SNF8-201ENST00000290330 ARVCFO00192 962 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 EDNRBP24530 442 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 SHHQ15465 462 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 FSCN1Q16658 493 aaKnown RBP12.22□□□□□ -0.45
SNF8-201ENST00000290330 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 STAG2Q8N3U4 1231 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 LTBP2Q14767 1821 aa12.22□□□□□ -0.45
SNF8-201ENST00000290330 LCTP09848 1927 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 ABCB11O95342 1321 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 RBM47A0AV96 593 aaKnown RBP12.21□□□□□ -0.45
SNF8-201ENST00000290330 E7EWF7 191 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
SNF8-201ENST00000290330 RAG1P15918 1043 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 C9orf50Q5SZB4 431 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 TBC1D5Q92609 795 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 MAF1Q9H063 256 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 TBX21Q9UL17 535 aa12.21□□□□□ -0.45
SNF8-201ENST00000290330 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.46
SNF8-201ENST00000290330 PALM3A6NDB9 673 aaPredicted RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 IFIT3O14879 490 aaKnown RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 ZEB2O60315 1214 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 CABYRO75952 493 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 EPHB4P54760 987 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 PDE4DQ08499 809 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 FBXO11Q86XK2 927 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 SLC43A3Q8NBI5 491 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 SENP2Q9HC62 589 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 MAD2L2Q9UI95 211 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 RBM8AQ9Y5S9 174 aaKnown RBP12.2□□□□□ -0.46
SNF8-201ENST00000290330 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
SNF8-201ENST00000290330 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 ERICH2A1L162 156 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 B4DLN1 442 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 TIMP1P01033 207 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
SNF8-201ENST00000290330 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 Q7L0L9 218 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 MCF2L2Q86YR7 1114 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
SNF8-201ENST00000290330 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
SNF8-201ENST00000290330 ZBTB5O15062 677 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 TLR3O15455 904 aaKnown RBP12.18□□□□□ -0.46
SNF8-201ENST00000290330 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
SNF8-201ENST00000290330 CD4P01730 458 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 ANTXR2P58335 489 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 FPGSQ05932 587 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 TROAPQ12815 778 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 GRM4Q14833 912 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 WTAPQ15007 396 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
SNF8-201ENST00000290330 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 MB21D2Q8IYB1 491 aaPredicted RBP12.18□□□□□ -0.46
SNF8-201ENST00000290330 IGDCC4Q8TDY8 1250 aa12.18□□□□□ -0.46
SNF8-201ENST00000290330 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
SNF8-201ENST00000290330 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms