RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CYP2C19P33261 490 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 MCM5P33992 734 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 EVCP57679 992 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 UBXN2AP68543 259 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 DHX32Q7L7V1 743 aaKnown RBP10.71□□□□□ -0.69
HMGN1-201ENST00000288344 MSL3Q8N5Y2 521 aaKnown RBP10.71□□□□□ -0.69
HMGN1-201ENST00000288344 TBC1D5Q92609 795 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 MMP19Q99542 508 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 TINF2Q9BSI4 451 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 MAF1Q9H063 256 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 KAT14Q9H8E8 782 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-201ENST00000288344 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-201ENST00000288344 CYP39A1Q9NYL5 469 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 FBXO40Q9UH90 709 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 MCM3APO60318 1980 aa10.71□□□□□ -0.7
HMGN1-201ENST00000288344 LAMA3Q16787 3333 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 KLRF2D3W0D1 207 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 COL6A1P12109 1028 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 ZKSCAN1P17029 563 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-201ENST00000288344 EMP3P54852 163 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 CNTN2Q02246 1040 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 FUT2Q10981 343 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 WTAPQ15007 396 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 PRAMEF19Q5SWL8 479 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 DPP9Q86TI2 863 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 CCAR1Q8IX12 1150 aaKnown RBP10.7□□□□□ -0.7
HMGN1-201ENST00000288344 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 DEFB118Q96PH6 123 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
HMGN1-201ENST00000288344 RNF146Q9NTX7 359 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 NRBP1Q9UHY1 535 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
HMGN1-201ENST00000288344 CEP290O15078 2479 aa10.7□□□□□ -0.7
HMGN1-201ENST00000288344 NFIBO00712 420 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 SLC34A2O95436 690 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-201ENST00000288344 PARP1P09874 1014 aaKnown RBP10.69□□□□□ -0.7
HMGN1-201ENST00000288344 HOXB1P14653 301 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-201ENST00000288344 NKX3-2P78367 333 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 KCTD2Q14681 263 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 QRICH1Q2TAL8 776 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 CCDC174Q6PII3 467 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 RALYLQ86SE5 291 aaKnown RBP10.69□□□□□ -0.7
HMGN1-201ENST00000288344 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
HMGN1-201ENST00000288344 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 ADCY6O43306 1168 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 ALAS1P13196 640 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 CPA1P15085 419 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 EDNRBP24530 442 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 MLLT1Q03111 559 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-201ENST00000288344 BAATQ14032 418 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-201ENST00000288344 RNF20Q5VTR2 975 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 MFSD14CQ5VZR4 134 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 ZNF654Q8IZM8 581 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 SRBD1Q8N5C6 995 aaKnown RBP10.68□□□□□ -0.7
HMGN1-201ENST00000288344 ANKLE1Q8NAG6 615 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 LRRC2Q9BYS8 371 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 COL20A1Q9P218 1284 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 BIN2Q9UBW5 565 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-201ENST00000288344 PNMA2Q9UL42 364 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 CCPG1Q9ULG6 757 aa10.68□□□□□ -0.7
HMGN1-201ENST00000288344 ZBTB5O15062 677 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 CTAGE5O15320 804 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 SEPT4O43236 478 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 DDAH1O94760 285 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 REC8O95072 547 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 KRT32Q14532 448 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 CDC37Q16543 378 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-201ENST00000288344 CCSAPQ6IQ19 270 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-201ENST00000288344 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 FANCBQ8NB91 859 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 TCEANC2Q96MN5 208 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 SPZ1Q9BXG8 430 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
HMGN1-201ENST00000288344 DDX49Q9Y6V7 483 aaKnown RBP10.67□□□□□ -0.7
HMGN1-201ENST00000288344 MYH6P13533 1939 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 PFASO15067 1338 aa10.67□□□□□ -0.7
HMGN1-201ENST00000288344 NID2Q14112 1375 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
HMGN1-201ENST00000288344 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 HMGB1P09429 215 aaKnown RBP10.66□□□□□ -0.7
HMGN1-201ENST00000288344 FECHP22830 423 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms