RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PLXNA1Q9UIW2 1896 aa22.99■■□□□ 1.27
TIMP4-201ENST00000287814 STK3Q13188 491 aa22.99■■□□□ 1.27
TIMP4-201ENST00000287814 HMX1Q9NP08 348 aaPredicted RBP22.99■■□□□ 1.27
TIMP4-201ENST00000287814 PAK6Q9NQU5 681 aaPredicted RBP22.99■■□□□ 1.27
TIMP4-201ENST00000287814 COL20A1Q9P218 1284 aa22.99■■□□□ 1.27
TIMP4-201ENST00000287814 SEC63Q9UGP8 760 aaKnown RBP22.99■■□□□ 1.27
TIMP4-201ENST00000287814 CCDC196A0A1B0GTZ2 297 aa22.98■■□□□ 1.27
TIMP4-201ENST00000287814 PPFIA3O75145 1194 aa22.98■■□□□ 1.27
TIMP4-201ENST00000287814 SNAI1O95863 264 aaPredicted RBP22.98■■□□□ 1.27
TIMP4-201ENST00000287814 CYBAP13498 195 aa22.98■■□□□ 1.27
TIMP4-201ENST00000287814 TMEM106CQ9BVX2 250 aa22.98■■□□□ 1.27
TIMP4-201ENST00000287814 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.98■■□□□ 1.27
TIMP4-201ENST00000287814 NOL8Q76FK4 1167 aaKnown RBP22.97■■□□□ 1.27
TIMP4-201ENST00000287814 MCF2L2Q86YR7 1114 aa22.97■■□□□ 1.27
TIMP4-201ENST00000287814 SYTL5Q8TDW5 730 aaPredicted RBP22.97■■□□□ 1.27
TIMP4-201ENST00000287814 LCTP09848 1927 aa22.97■■□□□ 1.27
TIMP4-201ENST00000287814 KIAA0100Q14667 2235 aaKnown RBP22.97■■□□□ 1.27
TIMP4-201ENST00000287814 CFBP00751 764 aa22.97■■□□□ 1.27
TIMP4-201ENST00000287814 GJB1P08034 283 aa22.97■■□□□ 1.27
TIMP4-201ENST00000287814 MSL3Q8N5Y2 521 aaKnown RBP22.97■■□□□ 1.27
TIMP4-201ENST00000287814 GPKOWQ92917 476 aaPredicted RBP eCLIP22.97■■□□□ 1.273e-7■■□□□ 14.1
TIMP4-201ENST00000287814 PHKBQ93100 1093 aa22.97■■□□□ 1.27
TIMP4-201ENST00000287814 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
TIMP4-201ENST00000287814 EN2P19622 333 aaPredicted RBP22.96■■□□□ 1.27
TIMP4-201ENST00000287814 HSD17B4P51659 736 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 GHRHRQ02643 423 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 TRAF1Q13077 416 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 ARMCX2Q7L311 632 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 TBC1D32Q96NH3 1257 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 DEFB118Q96PH6 123 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 TAAR1Q96RJ0 339 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.96■■□□□ 1.27
TIMP4-201ENST00000287814 SYNGAP1Q96PV0 1343 aa22.96■■□□□ 1.27
TIMP4-201ENST00000287814 LARGE1O95461 756 aa22.95■■□□□ 1.26
TIMP4-201ENST00000287814 HOXA13P31271 388 aaPredicted RBP22.95■■□□□ 1.26
TIMP4-201ENST00000287814 SCRN1Q12765 414 aa22.95■■□□□ 1.26
TIMP4-201ENST00000287814 WWC2Q6AWC2 1192 aa22.95■■□□□ 1.26
TIMP4-201ENST00000287814 ZNF865P0CJ78 1059 aaPredicted RBP22.94■■□□□ 1.26
TIMP4-201ENST00000287814 IFNAR1P17181 557 aa22.94■■□□□ 1.26
TIMP4-201ENST00000287814 ALDH5A1P51649 535 aaPredicted RBP22.94■■□□□ 1.26
TIMP4-201ENST00000287814 TYW1BQ6NUM6 668 aa22.94■■□□□ 1.26
TIMP4-201ENST00000287814 HEATR3Q7Z4Q2 680 aa22.94■■□□□ 1.26
TIMP4-201ENST00000287814 MAF1Q9H063 256 aa22.94■■□□□ 1.26
TIMP4-201ENST00000287814 PFKFB2O60825 505 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 DTNBO60941 627 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 CNGA1P29973 690 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 GJA8P48165 433 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 PKN1Q16512 942 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 ME3Q16798 604 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 LHX8Q68G74 356 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 U2AF1L4Q8WU68 220 aaKnown RBP22.93■■□□□ 1.26
TIMP4-201ENST00000287814 SHISA4Q96DD7 197 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 KATNBL1Q9H079 304 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 MKI67P46013 3256 aaKnown RBP22.93■■□□□ 1.26
TIMP4-201ENST00000287814 ASB14A6NK59 587 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 PRPF3O43395 683 aaKnown RBP22.93■■□□□ 1.26
TIMP4-201ENST00000287814 SGPL1O95470 568 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 MORC4Q8TE76 937 aa22.93■■□□□ 1.26
TIMP4-201ENST00000287814 SLKQ9H2G2 1235 aaPredicted RBP22.93■■□□□ 1.26
TIMP4-201ENST00000287814 ADD3Q9UEY8 706 aaKnown RBP22.93■■□□□ 1.26
TIMP4-201ENST00000287814 NECAB1Q8N987 351 aa22.92■■□□□ 1.26
TIMP4-201ENST00000287814 DNERQ8NFT8 737 aa22.92■■□□□ 1.26
TIMP4-201ENST00000287814 SLC26A6Q9BXS9 759 aa22.92■■□□□ 1.26
TIMP4-201ENST00000287814 NRBP1Q9UHY1 535 aa22.92■■□□□ 1.26
TIMP4-201ENST00000287814 CNPY2Q9Y2B0 182 aa22.92■■□□□ 1.26
TIMP4-201ENST00000287814 GCOM1H8Y6P7 765 aaPredicted RBP22.91■■□□□ 1.26
TIMP4-201ENST00000287814 POLR2MP0CAP2 368 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 ACVR2BQ13705 512 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 PFKFB3Q16875 520 aaPredicted RBP22.91■■□□□ 1.26
TIMP4-201ENST00000287814 IFFO2Q5TF58 517 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 ANO1Q5XXA6 986 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 USP17L6PQ6QN14 398 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 CRISPLD2Q9H0B8 497 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 MCM3APO60318 1980 aa22.91■■□□□ 1.26
TIMP4-201ENST00000287814 STXBP3O00186 592 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 MEIS2O14770 477 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 SEPT4O43236 478 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 EDNRBP24530 442 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 EEPD1Q7L9B9 569 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 SAMD3Q8N6K7 520 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 RMDN3Q96TC7 470 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 RNF26Q9BY78 433 aaPredicted RBP22.9■■□□□ 1.26
TIMP4-201ENST00000287814 ABHD16BQ9H3Z7 469 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 BARHL2Q9NY43 387 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 MAP3K20Q9NYL2 800 aaKnown RBP22.9■■□□□ 1.26
TIMP4-201ENST00000287814 DDX20Q9UHI6 824 aaKnown RBP22.9■■□□□ 1.26
TIMP4-201ENST00000287814 ZHX1Q9UKY1 873 aaPredicted RBP22.9■■□□□ 1.26
TIMP4-201ENST00000287814 CPLX1O14810 134 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 SCG2P13521 617 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 FCHSD1Q86WN1 690 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 PSTPIP2Q9H939 334 aa22.9■■□□□ 1.26
TIMP4-201ENST00000287814 CTDNEP1O95476 244 aa22.89■■□□□ 1.25
TIMP4-201ENST00000287814 ST3GAL1Q11201 340 aa22.89■■□□□ 1.25
TIMP4-201ENST00000287814 RABEP1Q15276 862 aa22.89■■□□□ 1.25
TIMP4-201ENST00000287814 NSUN6Q8TEA1 469 aaKnown RBP22.89■■□□□ 1.25
TIMP4-201ENST00000287814 PXMP2Q9NR77 195 aa22.89■■□□□ 1.25
TIMP4-201ENST00000287814 PDGFCQ9NRA1 345 aa22.89■■□□□ 1.25
TIMP4-201ENST00000287814 RBBP6Q7Z6E9 1792 aaKnown RBP22.88■■□□□ 1.25
TIMP4-201ENST00000287814 ADCY6O43306 1168 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms