RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 FAM160A1Q05DH4 1040 aa15.12■□□□□ 0.01
ACER3-201ENST00000278544 PNOCQ13519 176 aa15.12■□□□□ 0.01
ACER3-201ENST00000278544 PPP1R9AQ9ULJ8 1098 aa15.12■□□□□ 0.01
ACER3-201ENST00000278544 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
ACER3-201ENST00000278544 DDX39AO00148 427 aaKnown RBP15.11■□□□□ 0.01
ACER3-201ENST00000278544 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
ACER3-201ENST00000278544 EIF2AK2P19525 551 aaKnown RBP15.11■□□□□ 0.01
ACER3-201ENST00000278544 GJA5P36382 358 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 USP14P54578 494 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 LPAR1Q92633 364 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 RBSNQ9H1K0 784 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 ZNF536O15090 1300 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 EDIL3O43854 480 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 PTPREP23469 700 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 SMARCA1P28370 1054 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
ACER3-201ENST00000278544 CEP131Q9UPN4 1083 aa15.11■□□□□ 0.01
ACER3-201ENST00000278544 VWA5AO00534 786 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 CHMP2AO43633 222 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 STAT3P40763 770 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
ACER3-201ENST00000278544 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 BTNL9Q6UXG8 535 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 TRERF1Q96PN7 1200 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 ZBED4O75132 1171 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 DDX25Q9UHL0 483 aaKnown RBP15.1■□□□□ 0.01
ACER3-201ENST00000278544 SP4Q02446 784 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 COG2Q14746 738 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 TMEM132BQ14DG7 1078 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 DTHD1Q6ZMT9 781 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 FMR1NBQ8N0W7 255 aaPredicted RBP15.1■□□□□ 0.01
ACER3-201ENST00000278544 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 RANBP17Q9H2T7 1088 aaKnown RBP15.1■□□□□ 0.01
ACER3-201ENST00000278544 POLD4Q9HCU8 107 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 ABCB11O95342 1321 aa15.1■□□□□ 0.01
ACER3-201ENST00000278544 CALCRLQ16602 461 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 BLZF1Q9H2G9 400 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 GBA2Q9HCG7 927 aaPredicted RBP15.09■□□□□ 0.01
ACER3-201ENST00000278544 GCOM1H8Y6P7 765 aaPredicted RBP15.09■□□□□ 0.01
ACER3-201ENST00000278544 CUTAO60888 179 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 POLR2MP0CAP2 368 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 HUNKP57058 714 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 ARHGAP4P98171 946 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 SRPRBQ9Y5M8 271 aaKnown RBP15.09■□□□□ 0.01
ACER3-201ENST00000278544 ATAD5Q96QE3 1844 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 PPP6R2O75170 966 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 CMA1P23946 247 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 NCAPG2Q86XI2 1143 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 ENGASEQ8NFI3 743 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 IL31RAQ8NI17 732 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 RNF146Q9NTX7 359 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
ACER3-201ENST00000278544 DNAH12Q6ZR08 3092 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 FAM86B1E9PN63 330 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 COBLO75128 1261 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 FAM86B2P0C5J1 330 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 RPS6P62753 249 aaKnown RBP15.08■□□□□ 0.01
ACER3-201ENST00000278544 ATP2C1P98194 919 aaPredicted RBP15.08■□□□□ 0.01
ACER3-201ENST00000278544 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 DNAJC25Q9H1X3 360 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 CLSTN2Q9H4D0 955 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0.01
ACER3-201ENST00000278544 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
ACER3-201ENST00000278544 PRR29P0C7W0 189 aa15.08■□□□□ 0
ACER3-201ENST00000278544 BAATQ14032 418 aaPredicted RBP15.08■□□□□ 0
ACER3-201ENST00000278544 EEPD1Q7L9B9 569 aa15.08■□□□□ 0
ACER3-201ENST00000278544 DAGLBQ8NCG7 672 aa15.08■□□□□ 0
ACER3-201ENST00000278544 GPBP1L1Q9HC44 474 aaPredicted RBP15.08■□□□□ 0
ACER3-201ENST00000278544 CST9Q5W186 159 aa15.08■□□□□ 0
ACER3-201ENST00000278544 RESP18Q5W5W9 173 aa15.08■□□□□ 0
ACER3-201ENST00000278544 GALNT17Q6IS24 598 aa15.08■□□□□ 0
ACER3-201ENST00000278544 TAAR1Q96RJ0 339 aa15.08■□□□□ 0
ACER3-201ENST00000278544 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
ACER3-201ENST00000278544 MRPL11Q9Y3B7 192 aaKnown RBP15.08■□□□□ 0
ACER3-201ENST00000278544 ICAM1P05362 532 aa15.07■□□□□ 0
ACER3-201ENST00000278544 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
ACER3-201ENST00000278544 UBA7P41226 1012 aa15.07■□□□□ 0
ACER3-201ENST00000278544 POTEEQ6S8J3 1075 aa15.07■□□□□ 0
ACER3-201ENST00000278544 CATSPERGQ6ZRH7 1159 aa15.07■□□□□ 0
ACER3-201ENST00000278544 DDX19AQ9NUU7 478 aaKnown RBP15.07■□□□□ 0
ACER3-201ENST00000278544 OR52Z1P0C646 297 aa15.07■□□□□ 0
ACER3-201ENST00000278544 RAD51AP2Q09MP3 1159 aa15.07■□□□□ 0
ACER3-201ENST00000278544 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
ACER3-201ENST00000278544 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
ACER3-201ENST00000278544 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
ACER3-201ENST00000278544 NUDT12Q9BQG2 462 aa15.07■□□□□ 0
ACER3-201ENST00000278544 TSPY26PQ9H489 355 aa15.07■□□□□ 0
ACER3-201ENST00000278544 ESYT2A0FGR8 921 aa15.06■□□□□ 0
ACER3-201ENST00000278544 C19orf81C9J6K1 198 aa15.06■□□□□ 0
ACER3-201ENST00000278544 C2orf69Q8N8R5 385 aa15.06■□□□□ 0
ACER3-201ENST00000278544 SMCR8Q8TEV9 937 aaPredicted RBP15.06■□□□□ 0
ACER3-201ENST00000278544 ASCC2Q9H1I8 757 aaPredicted RBP15.06■□□□□ 0
ACER3-201ENST00000278544 BTBD7Q9P203 1132 aa15.06■□□□□ 0
ACER3-201ENST00000278544 DSG3P32926 999 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms