RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 BCL9LQ86UU0 1499 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 TBC1D31Q96DN5 1066 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 ZBTB12Q9Y330 459 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-201ENST00000278302 TAF1P21675 1872 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 COL4A1P02462 1669 aa8.47□□□□□ -1.05
TRIM6-201ENST00000278302 A0A087X0B3 334 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.05
TRIM6-201ENST00000278302 MFAP3LO75121 409 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 SCG2P13521 617 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 ERCC3P19447 782 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 MCM7P33993 719 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 NAP1L1P55209 391 aaKnown RBP8.46□□□□□ -1.05
TRIM6-201ENST00000278302 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.05
TRIM6-201ENST00000278302 SNX1Q13596 522 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 TUBB2AQ13885 445 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 CCNI2Q6ZMN8 369 aaPredicted RBP8.46□□□□□ -1.05
TRIM6-201ENST00000278302 CAGE1Q8TC20 777 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 ZBTB10Q96DT7 871 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 SPDL1Q96EA4 605 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 CCDC114Q96M63 670 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 TUBB2BQ9BVA1 445 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 HAUS2Q9NVX0 235 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 MTMR7Q9Y216 660 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 MYH6P13533 1939 aa8.46□□□□□ -1.05
TRIM6-201ENST00000278302 BAZ2AQ9UIF9 1905 aaKnown RBP8.46□□□□□ -1.05
TRIM6-201ENST00000278302 ORC4O43929 436 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 GYPCP04921 128 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 FGRP09769 529 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 EZRP15311 586 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 SLC7A5Q01650 507 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 ACCSLQ4AC99 568 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 CYB5D1Q6P9G0 228 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 ARPP21Q9UBL0 812 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 WNK3Q9BYP7 1800 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 CNTNAP5Q8WYK1 1306 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 WNT7AO00755 349 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 KIF5BP33176 963 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 CCT6AP40227 531 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 MATR3P43243 847 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 TFAP4Q01664 338 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 SPATA1Q5VX52 437 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 AP1ARQ63HQ0 302 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 SMYD4Q8IYR2 804 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 RNPC3Q96LT9 517 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 MKNK2Q9HBH9 465 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 NARFQ9UHQ1 456 aa8.46□□□□□ -1.06
TRIM6-201ENST00000278302 TPX2Q9ULW0 747 aaKnown RBP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM6-201ENST00000278302 SYNRGQ9UMZ2 1314 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 A0A1B0GTH6 734 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 GNPATO15228 680 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 USP17L8P0C7I0 530 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 LSP1P33241 339 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 GRIK3Q13003 919 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 TRAPPC11Q7Z392 1133 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 ARMC2Q8NEN0 867 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 ZNF473Q8WTR7 871 aaKnown RBP8.45□□□□□ -1.06
TRIM6-201ENST00000278302 GSDMAQ96QA5 445 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 CHP1Q99653 195 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 BLZF1Q9H2G9 400 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 ANKIB1Q9P2G1 1089 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 SAR1BQ9Y6B6 198 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 DUOX1Q9NRD9 1551 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 RRAGBQ5VZM2 374 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 SPATA20Q8TB22 786 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 RUFY1Q96T51 708 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
TRIM6-201ENST00000278302 COL22A1Q8NFW1 1626 aaPredicted RBP8.45□□□□□ -1.06
TRIM6-201ENST00000278302 LAMB2P55268 1798 aa8.45□□□□□ -1.06
TRIM6-201ENST00000278302 BACH1O14867 736 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 CAND2O75155 1236 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 CD44P16070 742 aaKnown RBP8.44□□□□□ -1.06
TRIM6-201ENST00000278302 MCM3P25205 808 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 ATP2C1P98194 919 aaPredicted RBP8.44□□□□□ -1.06
TRIM6-201ENST00000278302 DPYDQ12882 1025 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 PFKFB3Q16875 520 aaPredicted RBP8.44□□□□□ -1.06
TRIM6-201ENST00000278302 SBK1Q52WX2 424 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 TXNRD3Q86VQ6 643 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 FUKQ8N0W3 1084 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 RASSF8Q8NHQ8 419 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 SPATS2LQ9NUQ6 558 aaKnown RBP8.44□□□□□ -1.06
TRIM6-201ENST00000278302 IRAK4Q9NWZ3 460 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 FAM184BQ9ULE4 1060 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 CTNND2Q9UQB3 1225 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 CACNA1SQ13698 1873 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 GOLGA8KD6RF30 607 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 RPS6KA4O75676 772 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
TRIM6-201ENST00000278302 CALML3P27482 149 aa8.44□□□□□ -1.06
TRIM6-201ENST00000278302 NNTQ13423 1086 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms