RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PCDHGA12O60330 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 UBTFL1P0CB47 393 aaPredicted RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 ATF3P18847 181 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 NUCB2P80303 420 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 IFRD2Q12894 506 aaPredicted RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCBP1Q15365 356 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERC4-201ENST00000277817 MZT2BQ6NZ67 158 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 CREBRFQ8IUR6 639 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 FAM184AQ8NB25 1140 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 RUFY2Q8WXA3 655 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 KLF16Q9BXK1 252 aaPredicted RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 PRDM11Q9NQV5 511 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 ANKIB1Q9P2G1 1089 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 DDX20Q9UHI6 824 aaKnown RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA9Q9Y5G4 932 aaKnown RBP3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA8Q9Y5G5 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA7Q9Y5G6 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA6Q9Y5G7 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA3Q9Y5H0 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGA2Q9Y5H1 932 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 ATP6V1DQ9Y5K8 247 aa3.39□□□□□ -1.87
HERC4-201ENST00000277817 CRB1P82279 1406 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 SLX4Q8IY92 1834 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 ZNF236Q9UL36 1845 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 IRS4O14654 1257 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 DCTN1Q14203 1278 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 HSP90AA2PQ14568 343 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 MTERF2Q49AM1 385 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CCDC81Q6ZN84 652 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 RELL1Q8IUW5 271 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 PASD1Q8IV76 773 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 TTC5Q8N0Z6 440 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 SSH1Q8WYL5 1049 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 GCC1Q96CN9 775 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 RSRC1Q96IZ7 334 aaKnown RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 MPP4Q96JB8 637 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CDC5LQ99459 802 aaKnown RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 DHRS4Q9BTZ2 278 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 PCDHGB3Q9Y5G1 929 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 USP6P35125 1406 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 VPS37CA5D8V6 355 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 GFRA2O00451 464 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 VAMP4O75379 141 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CELA3AP09093 270 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 APBA1Q02410 837 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 ZNF252P-AS1Q0IIN9 211 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 FAAP100Q0VG06 881 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 SEPT6Q14141 434 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 TESK1Q15569 626 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 RPS26P11Q5JNZ5 115 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 AXDND1Q5T1B0 1012 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 CCDC70Q6NSX1 233 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 NYAP1Q6ZVC0 841 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 Q6ZVU0 165 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 REC114Q7Z4M0 266 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CHD1LQ86WJ1 897 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CCNJLQ8IV13 435 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 WDR75Q8IWA0 830 aaKnown RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 STK11IPQ8N1F8 1099 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 C1orf127Q8N9H9 656 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 RNF214Q8ND24 703 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 SCLYQ96I15 445 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 TRMT13Q9NUP7 481 aaKnown RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 TRHDEQ9UKU6 1024 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 GLULP15104 373 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 VEGFAP15692 232 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 FBLN1P23142 703 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CCNFP41002 786 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 ROR1Q01973 937 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 GRM3Q14832 879 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CCDC30Q5VVM6 783 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 TSHZ3Q63HK5 1081 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 CAVIN1Q6NZI2 390 aaKnown RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 TLDC1Q6P9B6 456 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 YIPF4Q9BSR8 244 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 PRR14Q9BWN1 585 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 BHLHE41Q9C0J9 482 aaPredicted RBP3.38□□□□□ -1.87
HERC4-201ENST00000277817 ST7Q9NRC1 585 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 DNM3Q9UQ16 869 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 SMC3Q9UQE7 1217 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 NUB1Q9Y5A7 615 aa3.38□□□□□ -1.87
HERC4-201ENST00000277817 hCG_1984214I3L0E3 225 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ORC4O43929 436 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 DDX58O95786 925 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 GNAI3P08754 354 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 CAPN2P17655 700 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GTF2E1P29083 439 aaPredicted RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 MRE11P49959 708 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 MECP2P51608 486 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 KCNC4Q03721 635 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 CYP4F3Q08477 520 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GPR155Q7Z3F1 870 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 SPATS2Q86XZ4 545 aaKnown RBP3.37□□□□□ -1.87
HERC4-201ENST00000277817 TTC30BQ8N4P2 665 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 GOLM1Q8NBJ4 401 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 ANAPC16Q96DE5 110 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 TM9SF2Q99805 663 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 MAST2Q6P0Q8 1798 aa3.37□□□□□ -1.87
HERC4-201ENST00000277817 AFF2P51816 1311 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms