RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
SHPRH-201ENST00000275233 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
SHPRH-201ENST00000275233 PCDHA7Q9UN72 937 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
SHPRH-201ENST00000275233 INPP5BP32019 993 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 SSH3Q8TE77 659 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 KCNG1Q9UIX4 513 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ATP1A2P50993 1020 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 RASSF7Q02833 373 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 CABS1Q96KC9 395 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 TTLL1O95922 423 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 SNX1Q13596 522 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 BFSP1Q12934 665 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 MTMR3Q13615 1198 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 TRIM56Q9BRZ2 755 aaKnown RBP12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 ECE1P42892 770 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 UBE2SQ16763 222 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 RSPH3Q86UC2 560 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 PIGSQ96S52 555 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 A0A087WWV3 80 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 LRRN2O75325 713 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 CASP2P42575 452 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 GRAMD1CQ8IYS0 662 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 CEP120Q8N960 986 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 SGK1O00141 431 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 WDR46O15213 610 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 PHBP35232 272 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 TTC19Q6DKK2 380 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 LRRC43Q8N309 656 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 ANKRD36BP1Q96IX9 119 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 CNOT6LQ96LI5 555 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 CASQ2O14958 399 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 EXOC3L4Q17RC7 722 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 MIS18BP1Q6P0N0 1132 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 USP17L2Q6R6M4 530 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 AMNQ9BXJ7 453 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 LARSQ9P2J5 1176 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 TFDP1Q14186 410 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 MTERF2Q49AM1 385 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 RSRC2Q7L4I2 434 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 KIF11P52732 1056 aa12.98□□□□□ -0.33
SHPRH-201ENST00000275233 TACO1Q9BSH4 297 aaKnown RBP12.98□□□□□ -0.33
SHPRH-201ENST00000275233 SOS2Q07890 1332 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 ATF2P15336 505 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 DYNLT1P63172 113 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 RBBP5Q15291 538 aaKnown RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 RINT1Q6NUQ1 792 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 RAPH1Q70E73 1250 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 MCUQ8NE86 351 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 TRIM58Q8NG06 486 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 CCDC68Q9H2F9 335 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 NSFP46459 744 aaKnown RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 P3H4Q92791 437 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 HDAC11Q96DB2 347 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 DBNLQ9UJU6 430 aaKnown RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 ABCC4O15439 1325 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 RNF8O76064 485 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 CCND2P30279 289 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 GRK7Q8WTQ7 553 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 TSC1Q92574 1164 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 SNX25Q9H3E2 840 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 PCDHA4Q9UN74 947 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 CDC25AP30304 524 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 TFAMQ00059 246 aaKnown RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 TMTC4Q5T4D3 741 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 HAUS1Q96CS2 278 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 HOXA13P31271 388 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-201ENST00000275233 MIPOL1Q8TD10 442 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 MTMR6Q9Y217 621 aa12.97□□□□□ -0.33
SHPRH-201ENST00000275233 HYOU1Q9Y4L1 999 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms