RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 GBP6Q6ZN66 633 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 CAPN12Q6ZSI9 719 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
SKP2-202ENST00000274255 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
SKP2-202ENST00000274255 ARAP3Q8WWN8 1544 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 CALCRLQ16602 461 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 RSRC2Q7L4I2 434 aaKnown RBP12.63□□□□□ -0.39
SKP2-202ENST00000274255 P2RX5Q93086 422 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ADAM33Q9BZ11 813 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
SKP2-202ENST00000274255 TMEM131LA2VDJ0 1609 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
SKP2-202ENST00000274255 MYO1FO00160 1098 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 GBP2P32456 591 aaPredicted RBP12.62□□□□□ -0.39
SKP2-202ENST00000274255 CTNNA1P35221 906 aaKnown RBP12.62□□□□□ -0.39
SKP2-202ENST00000274255 COPB2P35606 906 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 USP14P54578 494 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 SP4Q02446 784 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 NAA25Q14CX7 972 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 DISC1Q9NRI5 854 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 ZNF652Q9Y2D9 606 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 TMEM139Q8IV31 216 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 RWDD2AQ9UIY3 292 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
SKP2-202ENST00000274255 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 RCCD1A6NED2 376 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SLC1A4P43007 532 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 SCNN1DP51172 638 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SLC30A10Q6XR72 485 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 U2AF1L4Q8WU68 220 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 TMX4Q9H1E5 349 aaPredicted RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 ANKRD62A6NC57 917 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 PDE2AO00408 941 aaPredicted RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 BAG3O95817 575 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SLURP2P0DP57 97 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 ZNF18P17022 549 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SLC9C1Q4G0N8 1177 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 TMTC3Q6ZXV5 915 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 RAB34Q9BZG1 259 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 GNPATO15228 680 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
SKP2-202ENST00000274255 CCDC51Q96ER9 411 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 CPDO75976 1380 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 TMEM94Q12767 1356 aa12.61□□□□□ -0.39
SKP2-202ENST00000274255 NPHP3-ACAD11A0A0J9YXS1 232 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 PALMO75781 387 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 CLTAP09496 248 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
SKP2-202ENST00000274255 PPFIA1Q13136 1202 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
SKP2-202ENST00000274255 ANKRD42Q8N9B4 389 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 DDX47Q9H0S4 455 aaKnown RBP12.6□□□□□ -0.39
SKP2-202ENST00000274255 MYO1AQ9UBC5 1043 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 ATP8A1Q9Y2Q0 1164 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 ATP8B1O43520 1251 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
SKP2-202ENST00000274255 TMOD1P28289 359 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 TRIM14Q14142 442 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 RPS6KA1Q15418 735 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 IFT20Q8IY31 132 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 EYA3Q99504 573 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 SH2D3AQ9BRG2 576 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 NDST4Q9H3R1 872 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 KCNQ2O43526 872 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 LRRN2O75325 713 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 ICE2Q659A1 982 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 CNNM4Q6P4Q7 775 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
SKP2-202ENST00000274255 PTPN22Q9Y2R2 807 aa12.6□□□□□ -0.39
SKP2-202ENST00000274255 CLTCQ00610 1675 aaKnown RBP12.59□□□□□ -0.39
SKP2-202ENST00000274255 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
SKP2-202ENST00000274255 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms