RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 SLFN13Q68D06 897 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 LHX8Q68G74 356 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 TMTC3Q6ZXV5 915 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 CCDC82Q8N4S0 544 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 REPS2Q8NFH8 660 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 GMCL1Q96IK5 515 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 C11orf49Q9H6J7 331 aa20.51■□□□□ 0.87
SEC22C-202ENST00000273156 DIS3Q9Y2L1 958 aaKnown RBP20.51■□□□□ 0.87
SEC22C-202ENST00000273156 IGHA2P01877 340 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 CYP2C19P33261 490 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 OAZ1P54368 228 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 CSPP1Q1MSJ5 1256 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 LRRC47Q8N1G4 583 aaKnown RBP20.5■□□□□ 0.87
SEC22C-202ENST00000273156 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 DDX20Q9UHI6 824 aaKnown RBP20.5■□□□□ 0.87
SEC22C-202ENST00000273156 NRBP1Q9UHY1 535 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 A0A0G2JMZ2 1700 aa20.5■□□□□ 0.87
SEC22C-202ENST00000273156 GREB1LQ9C091 1923 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-202ENST00000273156 PRPF3O43395 683 aaKnown RBP20.49■□□□□ 0.87
SEC22C-202ENST00000273156 TRAK2O60296 914 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 COBLO75128 1261 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 PRPF40AO75400 957 aaKnown RBP20.49■□□□□ 0.87
SEC22C-202ENST00000273156 CNGA1P29973 690 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 GUCY1B3Q02153 619 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 RESTQ13127 1097 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 GRM4Q14833 912 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 FAM160B2Q86V87 743 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
SEC22C-202ENST00000273156 KIFC2Q96AC6 838 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 PLEKHA8P1O95397 391 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 SLC34A2O95436 690 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 NCLP19338 710 aaKnown RBP20.49■□□□□ 0.87
SEC22C-202ENST00000273156 SLC1A4P43007 532 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 STAT2P52630 851 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 SNRNP48Q6IEG0 339 aaKnown RBP20.49■□□□□ 0.87
SEC22C-202ENST00000273156 MAML3Q96JK9 1138 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 LZTS2Q9BRK4 669 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 SLC38A10Q9HBR0 1119 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 FBXO40Q9UH90 709 aa20.49■□□□□ 0.87
SEC22C-202ENST00000273156 RLFQ13129 1914 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 PLA2G6O60733 806 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 CYBAP13498 195 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 KRT85P78386 507 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 DNM1Q05193 864 aaKnown RBP20.48■□□□□ 0.87
SEC22C-202ENST00000273156 FUT2Q10981 343 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
SEC22C-202ENST00000273156 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
SEC22C-202ENST00000273156 CHAMP1Q96JM3 812 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 LMBRD1Q9NUN5 540 aa20.48■□□□□ 0.87
SEC22C-202ENST00000273156 RBM27Q9P2N5 1060 aaKnown RBP20.48■□□□□ 0.87
SEC22C-202ENST00000273156 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
SEC22C-202ENST00000273156 ZNF236Q9UL36 1845 aa20.47■□□□□ 0.87
SEC22C-202ENST00000273156 XBP1P17861 261 aa20.47■□□□□ 0.87
SEC22C-202ENST00000273156 MSL3Q8N5Y2 521 aaKnown RBP20.47■□□□□ 0.87
SEC22C-202ENST00000273156 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
SEC22C-202ENST00000273156 TMEM232C9JQI7 657 aa20.46■□□□□ 0.87
SEC22C-202ENST00000273156 MNX1P50219 401 aaPredicted RBP20.46■□□□□ 0.87
SEC22C-202ENST00000273156 IKQ13123 557 aaPredicted RBP20.46■□□□□ 0.87
SEC22C-202ENST00000273156 KRT40Q6A162 431 aa20.46■□□□□ 0.87
SEC22C-202ENST00000273156 SRBD1Q8N5C6 995 aaKnown RBP20.46■□□□□ 0.87
SEC22C-202ENST00000273156 ARRDC4Q8NCT1 418 aa20.46■□□□□ 0.87
SEC22C-202ENST00000273156 AIFM3Q96NN9 605 aa20.46■□□□□ 0.87
SEC22C-202ENST00000273156 CNPY2Q9Y2B0 182 aa20.46■□□□□ 0.87
SEC22C-202ENST00000273156 SEPT4O43236 478 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.87
SEC22C-202ENST00000273156 ATL3Q6DD88 541 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 CPXCR1Q8N123 301 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 TMEM87AQ8NBN3 555 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 CHST13Q8NET6 341 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.87
SEC22C-202ENST00000273156 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 COL6A1P12109 1028 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 ZNF792Q3KQV3 632 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 TINF2Q9BSI4 451 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 SCAND2PQ9GZW5 306 aaPredicted RBP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 CFAP45Q9UL16 551 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 COLQQ9Y215 455 aaPredicted RBP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 MTMR7Q9Y216 660 aa20.45■□□□□ 0.86
SEC22C-202ENST00000273156 DDX49Q9Y6V7 483 aaKnown RBP20.45■□□□□ 0.86
SEC22C-202ENST00000273156 DNM1LO00429 736 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 PGK2P07205 417 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 FAM173BQ6P4H8 233 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 DCAF4Q8WV16 495 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 ZNF396Q96N95 335 aaPredicted RBP20.44■□□□□ 0.86
SEC22C-202ENST00000273156 GJB4Q9NTQ9 266 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 CNTNAP5Q8WYK1 1306 aa20.44■□□□□ 0.86
SEC22C-202ENST00000273156 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
SEC22C-202ENST00000273156 GNL2Q13823 731 aaKnown RBP20.43■□□□□ 0.86
SEC22C-202ENST00000273156 STAG2Q8N3U4 1231 aa20.43■□□□□ 0.86
SEC22C-202ENST00000273156 TRPV1Q8NER1 839 aa20.43■□□□□ 0.86
SEC22C-202ENST00000273156 GDPD2Q9HCC8 539 aa20.43■□□□□ 0.86
SEC22C-202ENST00000273156 RAVER2Q9HCJ3 691 aaKnown RBP20.43■□□□□ 0.86
SEC22C-202ENST00000273156 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 FIBPO43427 364 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 PKN1Q16512 942 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 TKFCQ3LXA3 575 aa20.42■□□□□ 0.86
SEC22C-202ENST00000273156 ZNF467Q7Z7K2 595 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms