RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 IFNAR1P17181 557 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 SLC12A2P55011 1212 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 RESTQ13127 1097 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 KRT81Q14533 505 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 ARHGEF25Q86VW2 580 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 SIRT2Q8IXJ6 389 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 ZNF713Q8N859 430 aaPredicted RBP11.18□□□□□ -0.62
LAMA3-201ENST00000269217 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 METP08581 1390 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
LAMA3-201ENST00000269217 DMP1Q13316 513 aaPredicted RBP11.18□□□□□ -0.62
LAMA3-201ENST00000269217 POLA2Q14181 598 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
LAMA3-201ENST00000269217 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
LAMA3-201ENST00000269217 CPSF2Q9P2I0 782 aaKnown RBP11.18□□□□□ -0.62
LAMA3-201ENST00000269217 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 AMNQ9BXJ7 453 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 LEMD3Q9Y2U8 911 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 ZWINTO95229 277 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 GCFC2P16383 781 aaKnown RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 MYL7Q01449 175 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 HACE1Q8IYU2 909 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 SLC17A8Q8NDX2 589 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 GJA10Q969M2 543 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 KIF1BO60333 1816 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 GAP43P17677 238 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 MAN1A1P33908 653 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 EPHB4P54760 987 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 PTPROQ16827 1216 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 FAM114A2Q9NRY5 505 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 STK38LQ9Y2H1 464 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 XDHP47989 1333 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 M0QZ92 97 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 ATF7P17544 494 aaPredicted RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 YARSP54577 528 aaKnown RBP11.17□□□□□ -0.62
LAMA3-201ENST00000269217 NECTIN1Q15223 517 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 MIPOL1Q8TD10 442 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 EPSTI1Q96J88 318 aa11.17□□□□□ -0.62
LAMA3-201ENST00000269217 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 NR2F2P24468 414 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 VPS41P49754 854 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 BPIFB4P59827 614 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 MAP7Q14244 749 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 RIOK1Q9BRS2 568 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 SIK1P57059 783 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 IRX4P78413 519 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 VSTM4Q8IW00 320 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 SRPRBQ9Y5M8 271 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 NLRP1Q9C000 1473 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 SCNN1DP51172 638 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 MFAP3P55082 362 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 PTPN12Q05209 780 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 PSMD6Q15008 389 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 FTOQ9C0B1 505 aaKnown RBP eCLIP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 ENC1O14682 589 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 ADAT2Q7Z6V5 191 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 RNF14Q9UBS8 474 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
LAMA3-201ENST00000269217 SHROOM2Q13796 1616 aa11.16□□□□□ -0.62
LAMA3-201ENST00000269217 FAM170AA1A519 330 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
LAMA3-201ENST00000269217 LARGE1O95461 756 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
LAMA3-201ENST00000269217 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
LAMA3-201ENST00000269217 BFSP1Q12934 665 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 TXNDC9O14530 226 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 HIP1RO75146 1068 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
LAMA3-201ENST00000269217 LIFRP42702 1097 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 LMNB2Q03252 620 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 PTK2Q05397 1052 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 GOLGA8FQ08AF8 430 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 GOLGA8DPQ0D2H9 430 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 KIAA0825Q8IV33 1275 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
LAMA3-201ENST00000269217 CCDC170Q8IYT3 715 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 USP21Q9UK80 565 aa11.15□□□□□ -0.62
LAMA3-201ENST00000269217 DCAF15Q66K64 600 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms