RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 DNA2P51530 1060 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 GRIK5Q16478 980 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 MAP9Q49MG5 647 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 ARHGAP20Q9P2F6 1191 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 MYH10P35580 1976 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 TSPY3P0CV98 308 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 TSPY8P0CW00 308 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 AARSP49588 968 aaKnown RBP eCLIP18.84■□□□□ 0.61
RTN1-201ENST00000267484 CKAP4Q07065 602 aaKnown RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 SLC20A2Q08357 652 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 DYMQ7RTS9 669 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 DHTKD1Q96HY7 919 aaPredicted RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 PHLPP1O60346 1717 aa18.83■□□□□ 0.61
RTN1-201ENST00000267484 SND1Q7KZF4 910 aaKnown RBP eCLIP18.83■□□□□ 0.61
RTN1-201ENST00000267484 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.61
RTN1-201ENST00000267484 TCP11L1Q9NUJ3 509 aa18.83■□□□□ 0.61
RTN1-201ENST00000267484 NAPAP54920 295 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 GRM4Q14833 912 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 DNAJC21Q5F1R6 531 aaKnown RBP18.83■□□□□ 0.6
RTN1-201ENST00000267484 CREG2Q8IUH2 290 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 IFIH1Q9BYX4 1025 aaKnown RBP18.83■□□□□ 0.6
RTN1-201ENST00000267484 POLD4Q9HCU8 107 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 VAV2P52735 878 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 SPA17Q15506 151 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 EHBP1Q8NDI1 1231 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 VIPAS39Q9H9C1 493 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 BARHL2Q9NY43 387 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.6
RTN1-201ENST00000267484 ZPR1O75312 459 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 EIF4A3P38919 411 aaKnown RBP18.82■□□□□ 0.6
RTN1-201ENST00000267484 SF3B3Q15393 1217 aaKnown RBP18.82■□□□□ 0.6
RTN1-201ENST00000267484 C12orf60Q5U649 245 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 GLIS3Q8NEA6 775 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
RTN1-201ENST00000267484 UIMC1Q96RL1 719 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 TMEM47Q9BQJ4 181 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 SALL4Q9UJQ4 1053 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 OR52Z1P0C646 297 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 TXKP42681 527 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
RTN1-201ENST00000267484 DDB1Q16531 1140 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 TBC1D9BQ66K14 1250 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 MARCH10Q8NA82 808 aaPredicted RBP18.82■□□□□ 0.6
RTN1-201ENST00000267484 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 SH3GLB2Q9NR46 395 aa18.82■□□□□ 0.6
RTN1-201ENST00000267484 RPS6KA5O75582 802 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 SBK1Q52WX2 424 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 TMC4Q7Z404 712 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 MMTAG2Q9BU76 263 aaKnown RBP18.81■□□□□ 0.6
RTN1-201ENST00000267484 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
RTN1-201ENST00000267484 PCDHA13Q9Y5I0 950 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 DOT1LQ8TEK3 1739 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 TARSL2A2RTX5 802 aaKnown RBP18.81■□□□□ 0.6
RTN1-201ENST00000267484 KLRF2D3W0D1 207 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 DGKHQ86XP1 1220 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 CCDC170Q8IYT3 715 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
RTN1-201ENST00000267484 NUP58Q9BVL2 599 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 DEF6Q9H4E7 631 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 SNX12Q9UMY4 172 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 ZNF652Q9Y2D9 606 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 GOLGA6BA6NDN3 693 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 BUB1O43683 1085 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 KIF11P52732 1056 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 LRRC41Q15345 812 aa18.81■□□□□ 0.6
RTN1-201ENST00000267484 RRAGAQ7L523 313 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 SMCO2A6NFE2 343 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 KCTD19Q17RG1 926 aaPredicted RBP18.8■□□□□ 0.6
RTN1-201ENST00000267484 LRRC53A6NM62 1247 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 AKR1B10O60218 316 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 ZNF444Q8N0Y2 327 aaPredicted RBP18.8■□□□□ 0.6
RTN1-201ENST00000267484 MS4A14Q96JA4 679 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 UBA5Q9GZZ9 404 aa18.8■□□□□ 0.6
RTN1-201ENST00000267484 MCM3P25205 808 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 PLCD3Q8N3E9 789 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 SPATA4Q8NEY3 305 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 TBCKQ8TEA7 893 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 NOC3LQ8WTT2 800 aaKnown RBP18.79■□□□□ 0.6
RTN1-201ENST00000267484 SH2D4AQ9H788 454 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
RTN1-201ENST00000267484 GOLGA6CA6NDK9 693 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 GOLGA6DP0CG33 693 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
RTN1-201ENST00000267484 GJA10Q969M2 543 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 NDST4Q9H3R1 872 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 KANSL2Q9H9L4 492 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 GOLGA6AQ9NYA3 693 aa18.79■□□□□ 0.6
RTN1-201ENST00000267484 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 MYMKA6NI61 221 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 APBA1Q02410 837 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 RETREG2Q8NC44 543 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 AENQ8WTP8 325 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms