RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
SRRM4-201ENST00000267260 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 PLCH2O75038 1416 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 EIF3BP55884 814 aaKnown RBP13.12□□□□□ -0.31
SRRM4-201ENST00000267260 PDE1BQ01064 536 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 SCYL2Q6P3W7 929 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 DACH2Q96NX9 599 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 DDX28Q9NUL7 540 aaKnown RBP13.12□□□□□ -0.31
SRRM4-201ENST00000267260 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 DCLK2Q8N568 766 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 SNX5Q9Y5X3 404 aa13.12□□□□□ -0.31
SRRM4-201ENST00000267260 TADA3O75528 432 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 CHEK2O96017 543 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 MAGEA9P43362 315 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 TMEM259Q4ZIN3 620 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 KCTD16Q68DU8 428 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 TRPM2O94759 1503 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 CHGBP05060 677 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 TRPC1P48995 793 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 ADKP55263 362 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 OR9Q1Q8NGQ5 310 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 WARS2Q9UGM6 360 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 HLA-DPA1P20036 260 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 MSH2P43246 934 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 TRIM33Q9UPN9 1127 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 CTNND1O60716 968 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 NFKBIAP25963 317 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 KAZNQ674X7 775 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 DAB1O75553 588 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
SRRM4-201ENST00000267260 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
SRRM4-201ENST00000267260 E2F4Q16254 413 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 GPAA1O43292 621 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 GRIN1Q05586 938 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 ICE2Q659A1 982 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 SLC12A6Q9UHW9 1150 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 HSPA6P17066 643 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 TMOD1P28289 359 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 PBKQ96KB5 322 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 IFNAR2P48551 515 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 METTL13Q8N6R0 699 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 PTPN22Q9Y2R2 807 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 FLT4P35916 1363 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 YWHAGP61981 247 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 LRRC8BQ6P9F7 803 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
SRRM4-201ENST00000267260 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
SRRM4-201ENST00000267260 H7C0C1 242 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
SRRM4-201ENST00000267260 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ATP5OP48047 213 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
SRRM4-201ENST00000267260 MMS19Q96T76 1030 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 NLRC4Q9NPP4 1024 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
SRRM4-201ENST00000267260 ARHGAP26Q9UNA1 814 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 PTK2Q05397 1052 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
SRRM4-201ENST00000267260 DPH5Q9H2P9 285 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms